Sphingobium sp. EP60837: EP837_00198
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Entry
EP837_00198 CDS
T04432
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00198 (addA)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP837_00198 (addA)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EP837_00198 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
ANI76652
UniProt:
A0A173KS28
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All DBs
Position
1:219795..223235
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AA seq
1146 aa
AA seq
DB search
MGATMARKSSALQPLAGAQALAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENI
LCLTFTKAGAAEMADRIHDRLAAWVQMEEGELFADLEALHEESGPEARDRARRLFAEVLE
STGGGLRIQTIHGFCQQLLTAFPLEAELSPGFRPLDQREQAHLARQTLADLVVRAQEQGD
DALMQSLQAISLRLGEGGAEQFLIRCAAHLPALEQLPEGIAPWLYRELGLPEGDIIAHIA
SECDDAQFDMRSLAWVAQANADWGTGRALERCDRIARWRALDALGRAEMLADLHAAWAKA
DGDIISAKGWVPPIDGYGEASARLHSRCAELLSLKALATYADLLAQGLHAGRAYARAYGE
AKQLAGAVDFNDLIARTAGLLSQPGIADWIRYKLDQRIDHIMVDEAQDTNVSQWQIVGAL
AAEFFAGEGAKGDRVRTVFTVGDFKQAIFGFQGTSPQAFAAAQILFQRHAEDADHPFHDL
SLERSFRSTPAVLDVVDHTIATLNAERLGLPQGDVRHISANRFPGEVLLWKPAIAGLSDD
AEGEEDWVADQERLLAQNIARQIRQWIHDRMMLESRGRPVTAGDIMILVRRRSELARLIV
ARLYEEGVAVAGIDRLRLNAPLAVRDLLAALRFAVQPEDDLNLAALLVSPLIGWSQDDLM
IRAMGRRIGLWQHLARTLDDDLLAPLRTLLGRADLTTPYRYLEAILSGLMEGRRRLIERL
GIEATDPIEELLNAALAFESDDHPSLQRFVDWFDRGEVEIVRDAAAQGDSLRLLTVHGAK
GLQAPVVILADACLDPDAGTRSDSLAWNGLPILAPRKSERLGPIGQVLEDARAAEREEHW
RLLYVALTRAEERLIVTGSLGPRARGLSQPESWFSAVENALIALGAEWEDDPLWGARRRW
QGREVLPSRAPETSTVSESAVHAEPVWLRQPAPEEARPPRPLAPSAPVEDDVPYPPPTPA
MRAASERGRWLHALFERLPDVPPGQRRERADRWLQQQGASDSALRHDIIAQALRVIEDSD
FAPLFKPGALAEAPVAAVVGEVVVAGTVDRLCVSPDLVQVVDFKTGRIAPLTPEEVPSAH
VRQMAAYAAALQVIFPNRRIEAGLLYTSAPRLITLPDDLLAAHKPGFYPAEENLPLSPVE
TGASSS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgacgatggctaggaaatcaagcgctctccagccgctcgccggcgcgcaggcg
ctggccgccgcgcctgacgcgcatgtctggctttccgcctcggccggaacgggcaagacc
catgtgctgactgctcgcgtctttcgcctgctgcttcagggcgtgcggccggaaaatatc
ctctgtctcaccttcaccaaggctggtgcggccgaaatggccgaccgcattcatgatcgc
ctcgccgcctgggtccagatggaggagggcgaacttttcgcggatctggaggcgcttcac
gaagaatccggtccggaggcgcgcgaccgcgctcgtcgcctctttgccgaagtgctggaa
tccaccggcggcggtcttcgcatccagaccatccatggcttctgtcagcagttgctgacc
gcctttccgctagaggccgaactatcccccggtttccgtccccttgaccagcgcgaacag
gcgcatctagcccgccagacgctcgcggacctcgtcgtgcgcgcgcaggagcaaggcgac
gatgcactgatgcaatcgctgcaggcgatcagcttgcgcttgggcgagggcggggcggag
caattcctcatccgctgcgctgcgcacctcccggcgcttgaacagttgccggaaggcatc
gccccctggctctaccgcgaactcggcctgcccgaaggcgatattatcgcccacatcgcc
agcgaatgcgacgacgcgcagtttgatatgcgttctctcgcctgggttgcgcaggccaat
gcggattggggcacaggtcgtgcgctcgaacgttgcgatcgcatcgctcgctggcgcgcc
ctcgacgcccttgggcgagccgagatgctcgctgatctgcacgcggcctgggcgaaggcg
gacggcgacatcatctccgccaagggctgggtgccgccaatcgatggctatggcgaagca
agcgcgcggctccattcccgctgtgccgagctgttgagcctcaaggcgctggccacctat
gccgacctgctcgcccaggggctgcacgccggacgcgcctacgcccgcgcctatggcgaa
gcgaagcaactcgccggggccgtcgatttcaacgacctgatcgcccgcaccgcgggcctt
ctgtcgcagcccggcattgccgactggatccgctacaagctcgatcagcgcatcgatcac
atcatggtcgatgaagcgcaggacaccaatgtcagccagtggcagatcgtcggcgccctc
gccgccgagttttttgctggcgagggcgcgaagggcgacagggttcgaaccgtcttcacc
gtgggcgatttcaagcaggcgatcttcggattccagggcaccagcccgcaggcattcgcc
gccgctcagatcctgtttcagcgtcatgccgaggatgccgatcatccctttcacgacctg
tcgctggaacgcagcttccgttccacccccgcggtgctggatgtcgtcgatcatactatc
gccaccttgaacgccgaaagactgggcctccctcaaggcgatgtccgccatatcagcgct
aatcgctttcccggcgaggtcctgctctggaaaccggccatcgcgggcctgtctgatgac
gcggagggggaggaggattgggtcgccgatcaggaacgcctgctcgctcagaatatcgcc
cgccagatccgccaatggatccatgaccgcatgatgctcgaaagccgcggccgacctgtc
accgccggcgacatcatgatcctcgtccgccgccgcagcgaactcgcgcgcctgatcgtc
gcgcgactttatgaggagggggtcgccgttgccggtatcgaccgcctgcgcctcaacgcg
ccgcttgccgtgcgcgacctgctggcggcgttgcgcttcgccgtacagcccgaagatgat
ctgaacctcgccgcgctcctcgtctcgccgctgatcggctggtcgcaggacgatctgatg
atccgcgccatgggacgccggatcggcttgtggcagcatcttgcgcgcacgttggacgac
gatttgctcgcgccactccgcaccctgctgggccgcgcggacctcaccacgccctaccgt
tacctggaagcaatcctgtccggcctcatggagggacgccgccgcctgatcgagcggctg
ggcatcgaggccaccgacccgatcgaggaattgctgaacgccgcgctcgctttcgagagc
gacgaccatccctcgctccaacgcttcgtcgattggttcgaccggggcgaggtggagatc
gtccgcgatgctgcggcgcagggcgactcgcttcgtctgttgacggtccatggggcaaag
ggcctccaggcgccggtcgtcatactggctgacgcctgcctcgatccggatgccggaacg
cgtagcgactcgctggcgtggaatggcctgccgatcctcgccccgcgcaaatcggagcgg
cttggccccataggccaggtgctggaggacgcccgcgccgccgagcgggaggagcattgg
cggttgctctacgtcgcgcttacgcgtgcagaggaaaggctgatcgttaccggctcgctc
ggcccccgcgccagggggctgtctcagcccgaaagctggttcagcgccgttgaaaatgcg
ctcatcgctttgggcgccgagtgggaggatgaccccctatggggcgcccgccgccgctgg
caaggtagggaagtcctgccatctcgcgcacccgaaacctcaacggtcagcgaaagcgca
gtccatgccgaaccggtctggctgcgccagcctgcgccggaggaagcgcgtccgccccgg
cccctggcgccgtccgcgccggtcgaggatgacgttccctatcccccgcctacgcccgcc
atgcgtgccgccagcgaacgcggccgatggctgcacgcgctgttcgaacgcttgcccgat
gtgcccccaggccagcgcagggagcgcgcagaccggtggcttcagcagcagggtgcttcg
gactccgcgttgcgtcatgacatcatcgctcaggcgttgcgggtgatcgaagacagcgat
tttgcgcctctcttcaaacccggagccttggccgaagccccggtcgcggcggtcgtcggc
gaggtggtcgttgcaggaacggtggaccgcctttgcgtctctccggatctggtgcaggtc
gtggatttcaagactggccgcatcgcccccctgacgccggaggaagtgccgtccgcccat
gtgcgccagatggccgcctatgccgccgcgcttcaggtgattttccccaaccgccgcatt
gaggcggggctcctctataccagcgcgccgcgcctgatcacgcttcccgatgatctgctg
gcagcgcacaagcccggcttctaccccgcggaggagaatttgccgctttcacccgttgag
acgggtgcgtcatcatcctag
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