Sphingobium sp. EP60837: EP837_00253
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Entry
EP837_00253 CDS
T04432
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphb03032
]
EP837_00253 (gyrA)
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00253 (gyrA)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EP837_00253 (gyrA)
DNA replication proteins [BR:
sphb03032
]
Prokaryotic type
DNA Topoisomerases
EP837_00253 (gyrA)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EP837_00253 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF2835
Motif
Other DBs
NCBI-ProteinID:
ANI76704
UniProt:
A0A173KSH8
LinkDB
All DBs
Position
1:281107..283836
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AA seq
909 aa
AA seq
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MTDETALADPSDISPISIVEEMKASYLDYAMSVIVARALPDVRDGLKPVHRRILFSASES
GFHYNKPYRKSARIVGDVIGKYHPHGDSSIYDALARMTQDWAMRVPLIDGQGNFGSMDPD
PPAAMRYTEARLAKVAGALLEDLDKDTVDFQPNYDASESEPQVLPARFPNLLVNGAGGIA
VGMATNIPPHNLGEVIRACLAYIENPAISVDDIIQIVPGPDFPTAPLILGQSGARSAYHT
GRGSIMMRSRYVVEEGRGDRRSIVLTAIPYQVGKNGLVEKIAEAAKDKRIEGISDIRDES
NREGVRIVMDLKRDATPEVVLNQLWRNTPAQSSFPANMLAIRGGRPELLNIRDIIEAFVR
FREEVITRRTKYELNKARDRAHILLGLVIAVTNLDEVVRIIRGSASPAEARETLLARDWP
VAEIAPYLKLVEAIETEAGGDTYRLSDTQVRAILDLRLHRLTALGRDEIGNELAELAAAI
AEYLAILGDHKKLYAVMREEFEAIERDFATPRISEITAAADGIDDEDLIEREEMVVTVTV
QGYIKRTPLESFRAQARGGKGRSGMATKDEDAITELFVTSTHTPVLFFSTAGKVYRMKVW
RLPEGGPATRGRPMVNLLPLGPGETIQTVLPLPEDEESWKDLHVMFATANGTVRRNSMDA
FANVPSNGKIAMRFDEGSDDRLIGVALLTENDDVLLATRQGKAIRFPATDVREFQSRTST
GVRGMTLKGDDEVISLSILHRSGATQEERENYLRFAPWKPEKEGEPSMLPERFADLQAKE
QFILTVCANGYGKLSSAFDYRRTGRGGQGITNIDNIGRNGPVVASFPARHEDHLMLVTDQ
AKLIRMGLDTLRIIGRNSAGVRLFNVSDNEHVVSAAKIEESDEDDVTMPAGLEATPDVTP
EADPDLTEE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacgagactgccctcgccgacccctcggacatcagccccatctccatcgtggag
gagatgaaggcgagctatctcgactatgccatgtcggtcatcgtcgcccgcgccctgccg
gacgtgcgcgacggcctgaagcccgtgcatcgccgcattctcttctcggccagcgagtcc
ggcttccactacaacaaaccctatcgcaagtccgcacgcatcgtcggtgacgtgatcggt
aaataccatccccacggcgacagctcgatctatgacgccctggcgcgcatgacgcaggac
tgggccatgcgcgtcccgctgatcgatgggcaggggaactttggctcgatggaccccgat
ccgccggcggccatgcgctacaccgaagcacgcctcgccaaggtcgctggtgcgctgctc
gaagatctcgacaaggacaccgtcgatttccagcccaactacgacgcttcggaaagtgag
ccgcaggtcctgcccgcgcgcttcccgaacctgctggtcaacggcgcgggcggcatcgcg
gtcggcatggcgaccaacatcccgccgcataacctcggcgaagtgatccgcgcctgcctc
gcctatatcgaaaaccctgcgatcagcgtggacgacatcatccagatcgtccccggcccg
gacttcccgaccgccccgctgatcctcggccagtcgggcgcccgcagcgcctatcatacc
ggccgcggctcgatcatgatgcgctcgcgttatgtggtcgaggaagggcgcggcgaccgt
cgctcgatcgtgctgaccgccatcccgtaccaggtcggcaagaacggccttgtcgaaaag
atcgctgaggccgccaaggacaagcggatcgagggcatcagcgacattcgcgacgaatcg
aaccgggaaggcgttcgcatcgtcatggacctgaagcgcgacgccacgcctgaagtcgtg
ctcaaccaactctggcgtaacacgcctgcccagtcgagctttccggccaacatgctcgcc
attcgcggcggccgtccggaactgctcaacatccgcgacattatcgaggcctttgtccgc
ttccgcgaagaggtcatcacccgccgcaccaagtacgaactcaacaaggcccgcgaccgc
gcgcatatcttgctgggcctcgtcatcgcggtcaccaaccttgacgaagtcgtccgcatc
atccgcggctcggccagcccggcggaggcgcgcgaaaccctgctcgcccgcgactggccg
gtggcggaaatcgcgccctatctcaagctggtggaagcgattgagaccgaagccggcggc
gacacctaccgcctctcggacacgcaggtccgcgccatcctcgacctgcgcctgcatcgt
ctgacggccctcggccgcgacgagatcggcaatgagctggcggaactcgccgccgccatc
gctgaatatctcgccatcctcggcgaccacaagaagctctacgccgtcatgcgcgaggaa
ttcgaggcgatcgagcgcgacttcgccaccccgcgcatctcggaaatcactgccgctgcc
gatggcatcgacgacgaagacctgatcgagcgcgaggagatggtcgtcaccgtcaccgtg
cagggctatatcaagcgcacgccgctcgaaagcttccgtgcccaggcacgcggcggcaag
ggccgctccggcatggcgaccaaggatgaggatgcgatcaccgaactgttcgtgacttcc
acgcacacgccggtcctcttcttctccacggcgggcaaggtctatcgcatgaaggtctgg
cgcttgcccgagggcggcccggcgacgcgtggccgcccgatggtcaacctactgccgctc
ggccccggcgagacgatccagaccgtcctgccgctgcctgaggatgaggaaagctggaag
gacctgcacgtcatgttcgcgaccgcgaacggtacggtccgccgcaacagcatggacgca
ttcgccaatgtgccgagcaacggcaagatcgcgatgcgtttcgatgagggcagcgacgac
cgtctgatcggcgtcgctctcctcactgaaaatgacgatgtgctgctcgccacgcgacag
ggcaaggccatccgcttcccggctaccgacgtgcgcgaattccaaagccgcacctcgacc
ggcgtgcgcggcatgacgctgaagggtgacgacgaagtcatctcgctctccatcctccat
cgctccggcgcgacgcaggaagagcgcgagaactatctgcgcttcgctccctggaagccg
gaaaaggaaggcgagcccagcatgcttcccgaacgcttcgccgacttgcaggcgaaggaa
cagttcatcctcaccgtctgcgccaatggctatggcaagctgtcgagcgccttcgactat
cgccgcaccggacgcggcggtcagggcatcacgaacatcgacaatatcggccgcaacggc
cccgtcgtcgccagtttccctgcccgacatgaggatcatctgatgctcgtcactgaccag
gcgaagctgatccgcatgggcctcgacaccctgcgcatcatcggccgcaactcggcgggc
gtgcgcctcttcaacgtgtccgacaatgaacatgtcgtcagcgctgcgaagatcgaggaa
agcgacgaagatgatgtgacgatgcccgccgggctggaagcgactccggacgtcaccccc
gaagccgacccggaccttaccgaagagtga
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