Sphingobium sp. EP60837: EP837_00272
Help
Entry
EP837_00272 CDS
T04432
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03420
Nucleotide excision repair
sphb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP837_00272 (uvrD)
03430 Mismatch repair
EP837_00272 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00272 (uvrD)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP837_00272 (uvrD)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP837_00272 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EP837_00272 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ANI76723
UniProt:
A0A173KU76
LinkDB
All DBs
Position
1:299361..301637
Genome browser
AA seq
758 aa
AA seq
DB search
MTLPAPSPDDPAYLRGLNAPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRSY
PSEILAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLGGLIDQWKNKGLTPEEIGAGESEAYANGRG
QKLYAAYQARLRDVNACDFGDLLLHVLTILKRHRDVLESYQQRFRYVMVDEYQDTNSSQY
LWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDIGEKVRIIGVWDGPEEARRVGDEIETIERSGQSLDEV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGIPLALAAARILDTDEMTPQARRSLGAFIGDLARWRD
RAAQLPHAELARQILDESGYTAMLQAERTAESAGRLENLNELARAMEEYETLGAFLEHVS
LVMDNDAQAEERKITIMTIHAAKGLEFDTVFLAGWEEGIFPSQRALDEGGLNSLEEERRL
AYVAITRARKLCIILHAANRRIYGQWTSSIPSRFVGELPPEHVEEESSMAGGASLWRANW
SERADPFANVQRGSGRGPGWQRAQQSGQFTREPLRIVEARSSAVSLGNKGRDDMSVGLRI
FHQKFGYGTVAEIEGNKLEIDFETAGRKRVMDSFVQPA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcccgccccttcgcccgatgatcctgcctatcttcggggtctcaacgctccg
cagcgagaggccgtgctcacgaccgaagggccggtgctggtgcttgcgggcgcgggcact
ggcaagactgctgcactgacggcacgcttggcgcatcttatcgcgacccgccgctcttac
ccttctgaaatcctggccgtcaccttcaccaacaaggccgcccgagagatgcgcgagcgc
gtcgggcggatgatcggtcccgcggtagagggcatgccatggctgggcacttttcacgcc
atcgccgccaagatgctgcgccgtcatgccgaactggtgggcctccaatccaacttcacc
atcctggatacggatgaccaactccggttgatgaagcagttgatccaggctgaagggatt
gatgagaagcggtggcccgctcgtcagcttggtggtttgatcgaccaatggaaaaacaag
gggctaacgcccgaggagattggcgccggagagagcgaggcatatgccaacgggcgcgga
cagaagctgtatgctgcctatcaggcgcggctccgcgatgtgaacgcctgcgatttcggc
gacctcctgctccatgtcctgacgattttaaagcgtcatcgcgatgtgctggaaagctat
cagcaacggttccgttacgtgatggtcgatgaatatcaggatacgaacagcagccagtat
ctctggcttcggctgctggctcaacagcgcaagaatatttgctgcgtgggggacgacgac
cagtccatctattcctggcgcggcgcagaggtcgccaacatattgcgcttcgaaaaggat
ttcccgggcgcgaagatcgtccgcctcgaacagaattaccgatcgaccccccacatcctc
ggcgcggcttcgggtgtcattgcggagaatggcaaccggctcgggaaaactctctggacc
gacatcgacattggggagaaggttcgcatcatcggggtttgggatggcccggaggaagct
cgtcgtgtcggcgacgaaatcgaaaccatcgaacgatcaggccagtcgctcgatgaggtc
gcgatccttgtaagagcgcagcatcagacgcgggagttcgaagaccgatttatccagatc
ggcctgccctatcggatcgtgggcggctttcgtttctatgaacgtgcggaaattcgcgac
gccctggcctatctgcgactcgtcaatcagcccgccgacgatctggcgttcgaaaggatc
gtcaacgtccccaagcgcggtttgggtgacaaggctgtcgaaaagctccaccgcctcgcg
cgagccgagggcattcccctggcacttgcggccgcccgcatcctcgacacggacgaaatg
acgccgcaggcccgccgcagcctcggcgcgtttatcggcgaccttgcgcgttggcgcgac
cgtgctgcccagcttcctcatgctgaactggcccgccagatcctggacgaaagcggctac
accgccatgcttcaggcagagcgcacggccgaaagcgcgggccgcttggagaatctcaac
gaacttgcccgcgcgatggaggaatatgaaacgctgggggcgttcctagagcatgtgtcg
ctggtcatggacaatgacgctcaagctgaagagcgcaagatcacgattatgaccatccac
gccgctaaggggctggagttcgacaccgtgttcctcgcgggttgggaagagggcattttc
ccctctcagcgagcgctcgacgaaggtggcctcaacagcttggaagaagagcggcgcctc
gcctatgtcgcaatcacgcgcgcccggaagctgtgcatcatccttcacgccgccaaccgt
cgtatctatgggcaatggaccagttccatcccttccagattcgttggtgagttgccgccc
gaacatgtcgaagaagaaagcagcatggctggtggcgcgtcgctctggcgagcaaactgg
tcggagcgggcagatcccttcgccaatgttcagcgcggctccgggcgtggtcccggctgg
cagcgggcgcaacaaagcggtcaattcactcgcgaacctttacgcatcgtcgaagcccgc
tcctcggccgtgtcactcggaaataaggggcgggacgatatgagcgtcggcctacgcatt
ttccaccagaagttcggctatgggactgtggcggagatcgagggcaacaagttggagatc
gatttcgaaaccgcaggccgcaagcgcgtgatggatagctttgtccagcccgcttga
DBGET
integrated database retrieval system
