Sphingobium sp. EP60837: EP837_00293
Help
Entry
EP837_00293 CDS
T04432
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03030
DNA replication
sphb03430
Mismatch repair
sphb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP837_00293 (dnaX)
03430 Mismatch repair
EP837_00293 (dnaX)
03440 Homologous recombination
EP837_00293 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphb03032
]
EP837_00293 (dnaX)
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_00293 (dnaX)
Enzymes [BR:
sphb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP837_00293 (dnaX)
DNA replication proteins [BR:
sphb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP837_00293 (dnaX)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP837_00293 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_assoc_2
AAA_16
AAA_19
AAA_14
AAA_24
Cdc6_lid
Adeno_E1B_55K_N
AAA_18
DUF815
Glyco_tranf_2_5
AAA_2
PIF1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ANI76740
UniProt:
A0A173KSU7
LinkDB
All DBs
Position
1:complement(320574..322181)
Genome browser
AA seq
535 aa
AA seq
DB search
MSDSPQPYRVLARKYRPRNFRELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTA
RLIAKALNCVGEDGQGGPTIDPCGVCEPCRAIAEGRHIDVVEMDAASHTGVDDVREIIEA
VRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRC
QRFDLRRIPAELLAAHFAHVVEAEQVAAEEDALALIAQAAEGSARDGLSILDQAIAHAEM
GEGAPLVTAAQVREMLGLSDRGAVRRLLGLLLEGDTGALLGAVREQYALGVEPLALMRGL
LELVHAVTLVKAGRDIANPGQSAEEREALGDWASQIGFAPLHRLWQLLLKGHEEVGNAVF
PIESCEMALLRVMHAASMPDPGEIARLLREGGSVAVAQTASAPVASAGPSASLPKDVQAV
VDLLWEQKKGRLADFLHDCVRIVQFDPPQVELQLTQDWNEGDFCRTLAIELQRATGVTWQ
IRRSEGSAAPSLLEQQQENQARERAEIFDTPVVKAVLEAFPDADLDRTEPWSAER
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcacctcagccatatcgcgtgcttgcgcgcaaataccggccgcgcaacttc
cgcgaattgatcgggcaggacgctatggtccagacgctcggcaatgccatccggcgcgga
aggttggcgcatgccttcctgatgaccggcgtgcgcggggtcggcaaaacatcgaccgcc
cgtctgatcgccaaggcgctgaactgcgtcggggaagacggacagggtggtcccacgatc
gatccttgcggcgtgtgcgaaccttgccgcgcgatcgccgaagggcgtcatatcgacgtg
gtggagatggacgccgccagccacacaggcgtcgatgacgttcgcgagatcattgaggcg
gtgcgctatgcggcggtctccgctcgctacaagatatacatcatcgacgaagtccacatg
ctctcaaagaacgcgttcaacgcgcttctgaagacgttggaagagcccccggctcatgtg
aaatttctgttcgccacgacggaagtgaacaaggtgccggtcacggtgctttcccgctgc
cagcgcttcgacctccgccgcatcccggcggaactgctcgctgcccatttcgcgcatgtc
gtcgaagccgagcaggtggcggccgaagaagacgcactggccctcatcgcgcaggctgcc
gaagggtcggcgcgcgacggtctctccattctcgatcaggcgattgcgcatgccgagatg
ggcgagggcgctccgctggtcaccgctgctcaagtgcgcgaaatgctgggcctctcggat
cggggagcggttcgccggctgctgggcctgctgttggaaggtgacactggggcgctgctg
ggcgcggtgcgtgagcaatatgcgttgggcgtcgagccgttggcgctgatgcgcgggttg
ctggaactggttcatgccgtgacgctggtgaaggccgggcgcgacatcgccaatcccggt
cagtcagcggaggagcgcgaggcgcttggcgattgggcctcgcaaatcgggtttgcaccg
cttcatcgtctttggcagttgctgctgaaaggccatgaggaggtgggtaatgccgtcttc
ccgatcgaatcctgcgagatggcgctgctgcgggtcatgcacgcggcttccatgcccgac
ccgggcgagatcgcgaggctgttgcgcgaaggcggctctgttgcagtcgctcaaactgct
tcggcgccggtcgcgtctgcgggcccttctgcgtccctaccaaaagatgtgcaggcggtg
gtcgatctgctttgggaacaaaagaaggggcggctcgctgacttccttcatgactgtgtg
cggatcgtccaattcgatccgccccaagtggaattgcagctgacgcaggattggaacgag
ggcgatttttgccgcacgctggccattgaactgcagcgggcgactggcgtcacctggcag
atcaggcgcagcgaaggaagcgcggctccgtccctgctggagcagcaacaggaaaatcag
gcgcgcgaacgcgccgagatattcgataccccggtagtgaaggctgtgcttgaggccttc
cccgatgccgaccttgatcggaccgaaccatggagcgcagagcgatga
DBGET
integrated database retrieval system
