Sphingobium sp. EP60837: EP837_00302
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Entry
EP837_00302 CDS
T04432
Symbol
glyA
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00260
Glycine, serine and threonine metabolism
sphb00460
Cyanoamino acid metabolism
sphb00630
Glyoxylate and dicarboxylate metabolism
sphb00670
One carbon pool by folate
sphb00680
Methane metabolism
sphb01100
Metabolic pathways
sphb01110
Biosynthesis of secondary metabolites
sphb01120
Microbial metabolism in diverse environments
sphb01200
Carbon metabolism
sphb01230
Biosynthesis of amino acids
sphb01240
Biosynthesis of cofactors
sphb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EP837_00302 (glyA)
09102 Energy metabolism
00680 Methane metabolism
EP837_00302 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EP837_00302 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EP837_00302 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EP837_00302 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EP837_00302 (glyA)
Enzymes [BR:
sphb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EP837_00302 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ANI76749
UniProt:
A0A173KRL7
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All DBs
Position
1:328578..329897
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AA seq
439 aa
AA seq
DB search
MSTAPLAQPDLSDIRAEGYFSRSLADADPAVFAGVTKELKREQNQIELIASENIVSKAVL
EAQGSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQIFNCGFVNVQPHSGAQANGA
VMLALTKPGDTIMGLSLDAGGHLTHGAKPALSGKWYNAVQYGVREDTHLIDYGALEAQAI
EAKPTLIIAGGSAYPRHLDFARFRAIADKVGALLMVDMAHFAGLVAGGAHPTPFGFADVV
TTTTHKTLRGPRGGMILTNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEVLRPEFK
TYAQAIVTNAKALAAKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCN
KNGVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDKGEHGEPTVE
ANVRERVSALCARFPIYEG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcacccctcgcccagcccgacctgtccgatatccgcgcggaaggctatttc
tcgcgcagcttggccgatgccgatccggccgtgttcgctggcgtcaccaaggaactgaag
cgcgagcagaatcagatcgaactgatcgcgtcggaaaatatcgtgtcaaaggcggtgctg
gaggcgcagggcagcgtcttcaccaacaaatatgccgagggctatccgggaaagcgctat
tatcagggctgcgcgccgtcggatgaagtcgaacagctcgccatcgaccgcgcgaagcag
atcttcaactgcggcttcgtcaatgtgcagcctcattccggcgcgcaggcgaacggtgcg
gtgatgctggcgctgaccaagccgggcgataccatcatgggcctctcgctcgatgcgggc
ggccatcttactcacggtgcgaagcctgctctgtcgggcaagtggtacaacgcagtgcaa
tacggcgttcgcgaagacacgcatctgatcgactacggcgctctggaagcgcaagcgatc
gaggcaaagccgaccctcatcatcgcgggcggatctgcctatccccgtcacctggacttc
gcccggttccgcgcgatcgcggacaaggtgggcgcgctgttgatggtcgatatggcgcac
tttgcagggcttgttgcaggtggcgcacacccgacgcctttcggtttcgctgatgtcgta
accacgaccacccacaagacgctacgcggtccgcgcggcggcatgatcctcaccaatgac
gaagccattgccaagaagatcaactcggcagtgttccccggcctgcaaggcggcccgctg
atgcacgtcatcgccgccaaggccgttgctttcggagaggtgctccgtcccgagttcaag
acctacgcccaggcaattgtcaccaacgcaaaggcgctcgccgccaagctggagcagcgc
ggcctagccgtggtttccggcggcacggacacgcatctggcgctcatcgacctgcggcca
tacggcatctcgggcaaggacgccgacgaggcgctggagcgcagcttcatcacctgcaac
aagaatggcgtgccgggcgacccgctgccgccgaccaagaccagcggcatccgggtgggt
tcacccgccggaacgacgcgcggcttcggcgtggccgagttcgaagcgattggcgacatg
atcgccgacgttctggaaggactgcgcgataagggtgagcatggcgagccgaccgtcgaa
gccaatgtgcgtgagcgtgtgtccgccctttgtgcccgcttcccgatctacgagggctga
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