Sphingobium sp. EP60837: EP837_00609
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Entry
EP837_00609 CDS
T04432
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphb03016
]
EP837_00609 (truB)
Enzymes [BR:
sphb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EP837_00609 (truB)
Transfer RNA biogenesis [BR:
sphb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EP837_00609 (truB)
Prokaryotic type
EP837_00609 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ANI77049
LinkDB
All DBs
Position
1:complement(644041..645024)
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AA seq
327 aa
AA seq
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MHGWIILDKPHGLGSTQAVSAVKRALRQSGAGKVKVGHGGTLDPLATGVLPVAVGEATKL
AGRMLDSDKIYDFTIAFGAQTDTLDLEGKVIATSDHRPTLAEVEAVLPRFTGAIEQAPPA
FSAILIDGSRAYDLARQGQEVEMKLRSVTIHSLTVRHAELVSASIAPSGADACEEEWTLS
RQASETKQIQGDDRLAGVTLTAHVSKGTYIRSLARDFALALGTVGHVTMLRRVKAGPFAL
ETAISLDKLDEAARGGGIAQLMLPLTAGLDDIPALAVSPDDALALRQGKVLVGKPHTGLM
LAMEGQTPVALVEASGPEIRVVRGFNL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgacaaaccccatggccttggctccacccaggcggtgagc
gccgtcaaacgcgcgctgcggcagagtggcgcgggcaaggtgaaggtcggtcatggcgga
accctcgatccgctagcgaccggcgtgttaccggtggcggtgggcgaggcgacgaagctc
gcggggcggatgctcgacagcgacaagatttacgacttcacgattgcgttcggcgcgcag
acggacacgctggacctggaaggaaaggtgatcgcgacgagcgaccaccggccgacgctg
gcggaggtcgaggcggtattgccgcgcttcaccggggcgatcgagcaggcgcctcctgcc
ttttccgcgatcctgatcgacggctcgcgtgcctatgaccttgcccgtcaggggcaggag
gtcgagatgaagctgcggtcggtgacgatccactccctcacggtccgtcatgctgaactt
gtttcagcatccatcgcgccttcgggagcggatgcgtgtgaggaggaatggaccctgagc
cgacaggccagcgaaactaaacaaattcagggtgacgatagattggcgggtgtcaccctc
accgcccatgtctccaagggcacctatatccgctccctcgcgcgcgacttcgcgctggcg
ctcggcacggtcggccatgtcaccatgctccgccgggtgaaggcggggccgttcgccctg
gaaaccgcgatttcgctggacaaattggacgaagctgctaggggcggcggcatcgcgcag
cttatgctgccgttgacggcggggctggacgacatcccggctctcgcagtctctcccgac
gacgcattggctctccgacaggggaaggtgcttgtggggaaaccgcataccggcctgatg
ctggcgatggaggggcaaacgcccgtcgcgctggtcgaagccagtggcccggagatccgg
gtggtgcgcggctttaatctctaa
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