Sphingobium sp. EP60837: EP837_00923
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Entry
EP837_00923 CDS
T04432
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase (quinone)
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00020
Citrate cycle (TCA cycle)
sphb00190
Oxidative phosphorylation
sphb00650
Butanoate metabolism
sphb00720
Other carbon fixation pathways
sphb01100
Metabolic pathways
sphb01110
Biosynthesis of secondary metabolites
sphb01120
Microbial metabolism in diverse environments
sphb01200
Carbon metabolism
Module
sphb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EP837_00923 (sdhA)
00650 Butanoate metabolism
EP837_00923 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
EP837_00923 (sdhA)
00720 Other carbon fixation pathways
EP837_00923 (sdhA)
Enzymes [BR:
sphb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EP837_00923 (sdhA)
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
ANI77359
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All DBs
Position
1:complement(950449..952251)
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AA seq
600 aa
AA seq
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MSEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNENGTIYQ
RPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFAIDLIMENGE
CRGVIAICMEDGSIHRFRSKAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLPLQDL
EFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMAME
MREGRGVGPNKDHIFLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTVHYNM
GGIPCNYHGQVVTKVGDDPEVVVPGLYAVGEAACVSVHGANRLGSNSLIDLVVFGRATGL
HLKETIKPNGSHRPLPKDAADLALSRLDHYRNAKGGSPTAKIRLEMQHTMQKHAAVFRDS
ALLGEGVTKMAQVNASMQDVGVSDRSLIWNTDLIETLELDNLMSQAVCTMVSAENRKESR
GAHAHEDFPNRDDDNWMKHTVSWFEGWGGKGGKVSLDYRPVHDYTLTDEAEYIKPKARVY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcctacaagatcatcgatcatacctatgacacggtcgtggtgggcgcgggc
ggttcgggcctgcgcgcgaccatgggcagcgccgaagcgggcctgaagaccgcctgcatc
accaagctgttcccgacccgcagccacacggtcgccgcgcagggcggcatcgcggcttcg
ctgggcaacaattcgccggaccactggacctggcacatgtacgacaccgtgaaggggtcg
gactggctgggcgaccaggacgcgatcgaatatatggtgcgtgaagcgcccgcagccgtc
atcgagctggaacatgcgggcgtgccgttcagccgcaacgagaacggcaccatctaccag
cgtcccttcggcggccacatgcagaatatgggcgcaggcccgccggtgcagcgcacctgc
gccgccgccgaccgtacgggccacgcgatgctgcatgctctgtatcagcagagcctgaag
tatgacgcggacttctacatcgaatatttcgcgatcgacctcatcatggaaaatggtgag
tgccgcggcgtcatcgccatctgcatggaagatggatcgatccaccgcttccgttcgaag
gccgtggtgctggcgaccggcggctatggccgtgcctatttctccgccacctcggcgcat
agctgcaccggcgacggcggcggcatggtgctgcgcgcgggcctgccgctccaggacctg
gagttcgtgcagttccacccgaccggcatctacggcgcgggcgtgctgatcaccgaaggc
gcgcgcggcgagggcggctacctcaccaactccgaaggcgagcgcttcatggagcgctat
gccccctcggcgaaggatctagcgtcgcgtgacgtcgtgtcgcgctcgatggcgatggaa
atgcgcgaagggcgtggcgtgggtccgaacaaggaccacatcttcctgcacctcgatcat
atcgatcccaaggtgctggccgagcgtttgccgggcatcaccgagagcggcaagattttc
gcgggcgtcgatctgacccgtcagccgctgccggtgacgccgaccgttcactataatatg
ggcggcatcccctgtaactatcatggccaggtggtgacgaaggtcggcgacgatcccgaa
gtcgtggtgccgggcctctatgcggtcggcgaagcggcctgcgtgtcggtgcatggcgcg
aaccgcctgggctccaactcgctgatcgaccttgtcgtgttcggccgtgcgaccggcctg
caccttaaggaaacgatcaagcccaacggctcgcatcgtccgctgcccaaggatgcggcc
gatctggcgcttagccgcctcgaccattatcgcaacgccaagggcggttcgccgacggcg
aagatccgtctggaaatgcagcatactatgcagaagcatgccgctgtgttccgcgacagc
gcgctgctgggcgagggcgtcaccaagatggcgcaggtcaatgccagcatgcaggatgtc
ggcgtgtccgaccgctcgctgatctggaacaccgaccttatcgagacgctggagctggac
aacctgatgtcccaggcggtctgcaccatggtcagcgcggaaaaccgcaaggaaagccgc
ggcgcgcatgcgcatgaggatttcccgaaccgcgacgacgacaattggatgaagcacacc
gtcagctggttcgaaggctggggcggcaagggcggcaaggtgtcgctcgattaccgcccg
gtgcacgactatacgctcacggacgaggcggaatatatcaagcccaaggcgcgcgtctat
taa
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