KEGG   Sphingobium sp. EP60837: EP837_00992
Entry
EP837_00992       CDS       T04432                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sphb  Sphingobium sp. EP60837
Pathway
sphb00300  Lysine biosynthesis
sphb00470  D-Amino acid metabolism
sphb01100  Metabolic pathways
sphb01110  Biosynthesis of secondary metabolites
sphb01120  Microbial metabolism in diverse environments
sphb01230  Biosynthesis of amino acids
Module
sphb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sphb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EP837_00992
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EP837_00992
Enzymes [BR:sphb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     EP837_00992
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ANI77426
LinkDB
Position
1:complement(1012438..1013703)
AA seq 421 aa
MDHFDYVNGAMHVEQVPMAQIAQAVGTPVYIYSTATLTRHVNVFRDALSQLSDPLIAFAV
KANPNGAVLATLAKLGLGADVVSGGELLRAIAAGIPANRIVFSGVGKTAEEMRLALEHGI
FQFNLESEPEAEMLSEVALSMGKKAPVAYRINPDVDAGTHAKISTGKSENKFGIPYDRAL
DSYAAARDLPGLDVQGVAVHIGSQLTDLTPLEAAFTKVGALIEQLRAAGHAIRTADLGGG
LGVPYDPSLPIPPLPQAYGEMVTRVTQGWNVRLMFEPGRVIVGNAGALLSRVVRVKQGAQ
APFVIVDAAMNDLMRPSLYDAWHDIRAVDPVGRRATANVVGPVCETGDTFAMHRDMDVVQ
AGDLVAFMTAGAYGATMAGTYNSRPLTPEVLVSGDKWAVVRARPPIQALIEADSIPDWVK
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttggaccatttcgactatgtgaacggcgccatgcatgtggagcaggtgccgatggcacag
atcgcgcaagcggtcggcacgcccgtctatatctattccaccgccacgctgacgcgccac
gtcaatgtctttcgcgacgcgctgtcgcagcttagcgacccgctgatcgcctttgcggtg
aaggctaaccccaatggcgcggtgctggcgaccctggcgaagctggggctgggtgcggac
gtggtttcgggcggtgagcttctgcgcgcgatcgcggcaggcattccggcgaaccgcatc
gtcttttccggtgtcggcaagacggccgaggaaatgcgcctcgcgctggagcatggcatt
ttccagttcaacctggaaagcgagccggaagcggaaatgctgtccgaagtcgcgctgtcg
atggggaagaaggcgccggttgcttaccgcatcaaccccgatgtcgatgcagggacccat
gcgaagatctcgaccggcaagtctgaaaacaagttcggcatcccttatgatcgtgcgctg
gacagctacgccgccgcgcgcgatcttcccggcctggatgtgcagggcgtcgccgttcat
atcggcagccagctgaccgacctgacgccgctggaagccgctttcaccaaggtaggcgcg
ctgatcgagcagctgcgcgccgcgggtcatgcgatccgcaccgccgatctgggcggcggc
cttggcgtgccctatgatccgtcgctgccgatcccgccgcttccgcaagcctatggcgag
atggtgacgcgtgtgacccagggatggaacgtccgcctgatgttcgagcccggccgcgtc
atcgtcggcaatgcgggcgcgctgctgtcccgtgtcgtgcgggtgaagcagggggcgcag
gcgccttttgtcatcgtcgatgcggcgatgaacgatctgatgcgtcccagcctctatgac
gcctggcacgacattcgcgcagtcgatccggtgggacgacgggcgaccgccaatgtggtc
ggcccagtgtgcgagacgggcgataccttcgcgatgcaccgcgacatggatgtggtgcag
gcgggcgatctggtcgccttcatgaccgcaggcgcttatggcgcaaccatggccgggacc
tataacagccgtccactgacgcccgaagttctcgtttccggcgacaaatgggccgtggtc
cgcgcgcggccgccgatccaggcgctgatcgaagcggatagcatcccggattgggtcaag
gactga

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