Sphingobium sp. EP60837: EP837_01278
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Entry
EP837_01278 CDS
T04432
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03030
DNA replication
sphb03430
Mismatch repair
sphb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EP837_01278 (dnaQ)
03430 Mismatch repair
EP837_01278 (dnaQ)
03440 Homologous recombination
EP837_01278 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphb03032
]
EP837_01278 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_01278 (dnaQ)
Enzymes [BR:
sphb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EP837_01278 (dnaQ)
DNA replication proteins [BR:
sphb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EP837_01278 (dnaQ)
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EP837_01278 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF5710
Motif
Other DBs
NCBI-ProteinID:
ANI77707
LinkDB
All DBs
Position
1:complement(1309238..1310071)
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AA seq
277 aa
AA seq
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MNMHPDYRVQRRLVPVTHFHEVNPLTSGRIGVVIDVETTGLDRETDCIIELAVQRFRFDD
RGRIVQVGLPRVWREDPGIPIDPKITKLTGLAVDDVAGQAIDEEMAVEILSSADIIIAHN
AAFDRPFIDRRLPAIADKPWACSMAELDWLELGFEGRALAHLVAQCGWFYEGHRAENDIL
ALLYLLSHGLSDGTTILSKLIECSERPTYRVNAIDAPFDAKDRLKARGYRWDAAMRFWWK
SVGQDESDVERAWLNSDVYAGYGEPAFIPVTACERHR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatgcatcctgattaccgcgtgcagcgccgccttgttcctgtcacccacttccat
gaggtgaatccgctaacgtccggtcggatcggcgtggtaatcgatgtggagacgaccggt
ctcgatcgcgaaaccgattgcatcatcgagttggctgtgcagcgcttccggttcgatgat
cgtgggcggatcgtacaggtagggttgccgcgggtgtggcgtgaagatcccggcatcccg
atcgatccgaagatcaccaaacttaccggcctcgcagtagacgacgttgccggccaggca
attgacgaagagatggctgtggaaattctttcgtccgccgacatcatcattgctcacaat
gccgcgttcgacaggccgtttattgatcggcgtctgccggccattgccgacaagccctgg
gcctgctcgatggctgaactggattggcttgagctcgggttcgaggggcgtgccctcgcg
catctcgtcgcgcaatgcggttggttctatgaagggcacagggccgaaaacgatattctt
gcgcttctgtatctgctctcccacggattatccgacggaacgacgatcctgtcgaagctc
atcgagtgctcagaacggccgacatatcgggtgaatgccatcgatgcgccttttgatgcc
aaggatcggttgaaggcacggggctatcgctgggacgcagccatgcgtttctggtggaag
agcgtcggccaggacgagagtgatgtcgaacgcgcctggctgaatagcgatgtctatgct
ggatatggtgagccagcattcatccccgtaacggcctgcgaacggcatcgatga
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