Sphingobium sp. EP60837: EP837_01438
Help
Entry
EP837_01438 CDS
T04432
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EP837_01438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphb03021
]
EP837_01438
03019 Messenger RNA biogenesis [BR:
sphb03019
]
EP837_01438
Transcription machinery [BR:
sphb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EP837_01438
Messenger RNA biogenesis [BR:
sphb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EP837_01438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
S1CSD-TOTE-2
Spore_III_AA
NACHT
Fungal_virus_P2_C
AAA
AAA_25
AAA_14
GpA_ATPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANI77860
LinkDB
All DBs
Position
1:complement(1465578..1466834)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLKDLKKKSPADLVTMAEELGVEGASTLRKQDLLFAILKAEAENGEQIMGEGTIEVLPD
GFGFLRSPEANFLAGPDDIYVSPNQVRKFGLRTGDTVEGEIRAPKDGERYFALTKLMSVN
FDDPEVVRHRVNFDNLTPLYPTQKLVLDTLDPTVKDKSARVIDIVSPQGKGQRALIVAPP
RTGKTVLLQNIAKAITDNHPEVFLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPALDV
GKSGTRKEELLVDKAKLSKMWVLRRILMQMGTIDAMEFLLDKMKDSKTNEDFFDSMNQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttaaggacctcaagaagaaatcacccgccgaccttgtcaccatggcggaggag
ttgggcgtcgaaggcgcatcgaccttgcgtaagcaggacctgctgttcgcgatcctcaag
gccgaagcggaaaatggcgagcagatcatgggcgagggcacgatcgaggtgttgcccgac
ggcttcggcttcctgcgcagcccggaagcgaatttcctggccggtcctgacgatatttat
gtttcgcctaatcaggtccgcaaattcggcctgcgaaccggcgatacggtggaaggcgaa
attcgcgcgcccaaggatggcgagcgctatttcgcgctgaccaagctgatgtcggtcaat
ttcgacgatcctgaagtcgtccgccatcgcgtcaatttcgacaatctgacgccgctttat
ccgacccagaagctggtgctcgatacgctggacccgacggtcaaggacaagtcggcgcgc
gtcatcgatatcgtctcgccgcagggcaaggggcagcgcgcattgatcgtcgcgccgccg
cgcacgggtaagacggtcctgctccagaacatcgccaaggcgatcaccgacaatcaccct
gaagttttcctgatcgtcctgctgatcgacgagcgtccggaagaagtcaccgacatgcag
cgcagcgtgaagggcgaggtcgtctcctcgaccttcgacgagcccgcgtcgcgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtggaacataagaaggatgtg
gtgatcctgctcgactcgatcacgcgccttggccgcgcctacaacacggtggtgccgtcg
tcgggcaaggtgctgaccggcggtgtggacgccaacgcgctgcagcggcccaagcgcttt
ttcggcgctgcgcgcaacatcgaggaggggggctcgctctccatcatcgcgacggcgttg
atcgacaccggcagccgcatggacgaagtcatcttcgaagagttcaagggcaccggcaac
tcggaaatcgtgctggaccgcaaggtcgccgacaagcgcattttcccggcgctggacgtc
ggcaagtcgggcacccgcaaggaagagctgctggtcgacaaggccaagctgtccaaaatg
tgggtgctgcgccgtatcctgatgcagatgggcacgatcgatgcgatggaattcctcctc
gacaagatgaaggattccaagaccaacgaagacttcttcgattcgatgaaccagtaa
DBGET
integrated database retrieval system
