Sphingobium sp. EP60837: EP837_01591
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Entry
EP837_01591 CDS
T04432
Name
(GenBank) Protein CdcH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphb03019
]
EP837_01591
03009 Ribosome biogenesis [BR:
sphb03009
]
EP837_01591
04131 Membrane trafficking [BR:
sphb04131
]
EP837_01591
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphb04147
]
EP837_01591
Messenger RNA biogenesis [BR:
sphb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EP837_01591
Ribosome biogenesis [BR:
sphb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EP837_01591
Membrane trafficking [BR:
sphb04131
]
SNARE
SNARE associated proteins
Others
EP837_01591
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EP837_01591
Exosome [BR:
sphb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EP837_01591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
NACHT
nSTAND3
AAA_18
AAA_28
RNA_helicase
Mg_chelatase
AAA_30
AAA_7
AAA_24
AAA_11
AAA_17
Sigma54_activat
DUF815
AAA_19
AAA_3
Zeta_toxin
TsaE
Parvo_NS1
ABC_tran
bpMoxR
NB-ARC
ATPase
PhoH
SLFN-g3_helicase
Sigma54_activ_2
Vps4_C
AAA_25
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ANI78007
UniProt:
A0A173KVX5
LinkDB
All DBs
Position
1:1622198..1624492
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AA seq
764 aa
AA seq
DB search
MAEQDSPERRIQVANARPEDAGRGLARIPLAVMAELDLAEGDVIEIAGKRSTPARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVQISKVEPRAAQRVVFAPAQNNLRLQGNPDALKR
VFFQRPLASGDIVATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTTPKGVVQID
ADTEIELRAEYEEPRELRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPK
GVLLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAAAKSSPS
ILFIDEIDSIAPKRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREIMGIHTRGMPLAEGVDLGELARMTYGFVGADLAALTREAA
IEAVRRFMPRLNLEEGTIPPDVLEELSVTRDDFMAAIKRVQPSAMREVMVQAPNIGWADI
GGLDDAQMRLKEGVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEPAVTERV
VNTILAEMDGLEELQSVVVIGATNRPTLIDPALLRPGRFDELIYVPVPDKAGRRRILAIH
TGKMPLAEDVDLDDLAARTERFTGADLEDLVRRAGLVALRQSLSVDKVGHAHFEAALEET
RASVTPEMEREYEQIQAQLKQSAMRVEPIGFVSPDMLRSRDRQS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaggacagcccggaacgcaggattcaggtggccaatgcgaggccggaggat
gcaggccgtgggcttgcgcgcattccattggcggtgatggcggaactcgacctcgctgaa
ggcgacgtgatcgagatcgctggcaagcggtccacgcccgctcgcgtggtgcggccgtac
aaggaagatgaagggctggatgtgctgcgcctcgacggcctgcagcgcgctaatgccggt
gtcgggtcgggcgatttcgtgcagatcagcaaggtcgaaccccgcgcggcacagcgtgtg
gtcttcgcacctgcacaaaataacctgcgacttcagggcaatcctgacgcgctgaagcgg
gtgttttttcagcggcccttggcgtccggcgatatcgttgcgacagccgggcagcaacag
gtgccgccgggcgacatgccgcctcagctgcgccaaatgctggccgcacctgcctatgcg
ctgcaggaaatccgccttgtcgtcgtgtccaccacgcccaagggcgtcgtccagatcgat
gcggatacggagatcgaacttcgcgccgaatatgaagagccgcgcgaactgcggcgggcg
gacgtcacctatgacgatgtgggcgggatggccgaggctatcgaccaactgcgcgagatg
gttgaactgccgctgcgctatcctgaactgttcgaacgcttaggcgtagatccaccgaag
ggcgtattgctgcacggcccgccgggaacgggcaagacgcgcctggcgcgggcggtcgcc
aatgaatcggaggccgagttcttcctgatcaacggtccagaaatcatggggtcggcctat
ggcgagtccgaaaagcagctgcgcgagatattcgaggcggcggcgaagtcgtccccctcg
atcctgttcatcgacgagattgattcgatcgcgcccaagcgtggcaatgtgaccggcgaa
acggaaaagcggctggtcgcgcagttactaacgctgatggacggcctggagccgcgcacc
aatctggtcgtcatcgccgccaccaaccggcccgaagcgatcgacgaggcgctgcgccgg
ccaggccgtttcgaccgcgaaatcatcgtcggtgttcccgacgagcgcggccggcgcgag
attatgggtattcacacgcgcggcatgccgctcgctgagggcgtagatctcggcgaactg
gcgcggatgacctacggttttgtgggcgccgacctagccgcgctgacccgcgaggcggcg
atcgaggcggtgcgccgcttcatgccgcgcctcaatctggaggaaggcacgattccgccc
gatgtgctggaggagctgtcggtcacgcgggatgatttcatggcggcgatcaagcgtgtc
cagccttccgcgatgcgtgaggtaatggtgcaggcgcccaatatcggctgggccgacatt
ggcggcctggacgatgcgcaaatgcgcctcaaggaaggcgtggagttgccgctgaaagac
cccgacgcgttccgccgcatcggtattcgtccggcgaaggggttcctgctctatgggccg
cccggcaccggcaagaccctgctggcgaaggcggttgcgcgagaggcgcaggcgaatttc
attgcgactaagtcgagcgacctcctgtccaaatggtatggcgagagcgagcagcagatc
gcccgcctgttcgcccgcgcgcggcaggtggcgccgaccgtcatcttcatcgacgaactg
gatagcctggtcccggcgcgtggcggtggcctgggcgaaccggcggtgacggagcgggtg
gtgaacaccatccttgccgagatggacgggcttgaagagttgcagtcggtggtcgtcatc
ggcgcgaccaaccggccgacgctgatcgaccctgccttgctgcggccgggacgctttgat
gaactcatctatgtgcctgtgcctgacaaggccgggcgtaggcgcatcctggcgatccac
acgggtaagatgccgctggccgaggatgtcgatctggatgatctggcggcccgcaccgag
cggtttacgggtgcggacctggaggacttggtgcgtcgggcaggcttggtcgcgctgcgc
caatccttgtcggtcgataaggtcgggcatgcgcatttcgaagcagcgcttgaggaaacc
cgcgcctcggtcacgccggaaatggagcgcgaatatgagcagatacaggcgcagctgaaa
cagagcgccatgcgcgtcgagccgatcggctttgtgtctcccgacatgctgcgatcgcgc
gatcgtcaatcttaa
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