Sphingobium sp. EP60837: EP837_01594
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Entry
EP837_01594 CDS
T04432
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00541
Biosynthesis of various nucleotide sugars
sphb01100
Metabolic pathways
sphb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EP837_01594 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sphb01005
]
EP837_01594 (kdsA)
Enzymes [BR:
sphb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
EP837_01594 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sphb01005
]
Lipid A
EP837_01594 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ANI78010
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Position
1:complement(1626723..1627544)
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AA seq
273 aa
AA seq
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MTKHVSIGPLTIGNDLPFVLISGPCQIENRDHALMMADRLSGIAAKAGVPFIFKSSFDKA
NRTSVSGQRGVGIDAGLSILAEVKARFGCPVLTDVHDAGQVEAAAEAVDILQIPAFLCRQ
TDLLLAAGRTGAVVNVKKGQFLAPWDMAAVAQKVASTGNERILLTERGASFGYNALVSDM
RSLPVMAQTGYPVVFDATHSVQQPGGLGSASGGQREFAPVLARSAVAAGVAAIFAEAHDD
PDNAPSDGPVMLPLEWIQPLLGKLKAIDAAMKG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacatgtttccatcgggccgctgacgatcggcaacgacctgcccttcgtcctg
atctccggcccctgccagatcgaaaaccgcgatcatgcgttgatgatggcggacagactg
tccggcatcgctgcgaaggcaggcgtgccgttcatcttcaaatcctctttcgacaaagcg
aaccggacctccgtctccgggcagcgtggtgtaggcatagacgccgggctttcgatcctg
gccgaggtgaaagcgcgcttcggctgccccgtgctgaccgatgtgcatgacgcgggccaa
gtagaggcagcggcagaggcggtcgatatccttcagattccggccttcctgtgccgccag
accgacctgctcctcgcagccggacggacgggcgcagtcgtcaatgtgaagaagggtcag
ttcctggcgccgtgggacatggcggcggtggcgcagaaggtcgcctcaacaggcaacgag
cgcatcctgcttaccgagcgcggcgcgagtttcggctacaacgcattggtcagtgacatg
cgatcgctgccggtcatggcgcaaaccggctatccggtagtgttcgacgccactcattcg
gtgcagcagccgggcgggcttggatcagcctctggcgggcagcgggaatttgcgcccgtg
ctggcgcgtagcgcggttgcagcaggggtagcagcgatcttcgccgaggcgcatgacgat
ccggacaatgcgccttccgacggccctgtcatgctgccactggagtggattcagccgctg
ctcggaaagctgaaggccattgacgcggcgatgaagggatag
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