Sphingobium sp. EP60837: EP837_01710
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Entry
EP837_01710 CDS
T04432
Name
(GenBank) Nuclease SbcCD subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_01710
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP837_01710
Archaeal homologous recombinant proteins
EP837_01710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Nuf2_DHR10-like
AAA_22
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANI78122
UniProt:
A0A173KW02
LinkDB
All DBs
Position
1:complement(1749649..1753356)
Genome browser
AA seq
1235 aa
AA seq
DB search
MRVLAIRGRNLASLSGDFEVDFEAEPLSDAGIFAITGPTGAGKSTLLDAMCLALFDSVPR
LGAAPARARIETAQGDELSAGDPRAILRHGSGEGYAELDFVGRDGERYRARWTVQRARQK
TDGRMQATRHNLTRLADGEILGGTKTETLAEIHRLVGLSAEQFRRAVLLAQGDFEAFIKA
DDNERAQLLERLTGSHIYASLGRAAHEKATTIRAQQQAILDRIEAQNGLDDEARQIAEEQ
HSAAKDVADRTASTLGELSKAVRWESDRTALANKVTECELAVSIANTAREEAAPRHEALR
LRKAAFALAGDWTAVQDAATLAQEARQTVVLRQSEFEQASERATQTAAEESHAAAQLQLE
TERVAAQSPEIEEARVLDRKLFETNASLDGIAGVRATRAQALSRCRELEQAANILLAEAA
ETRDGQASWLAANAGLATLAAQEQELAAELVEIAAVDIKLSELSESVKEAEASKIEANAT
WEAAKAAEEGTAAAATWARNILDEAKASAPSDAAFSAIIEKRDRLGGLSPLLVDWKHQEA
QVETSRDLLVRLRSNLDDAKAERKDLVVRHSQVSSSLPILRAQLQEARRAGELAETASGE
AAMQLRATLEDGQACPVCGATEHALSAIDSLLGLQLREQRERIAQLDASLSSKTAEEAAL
AAGIQATDQSILRLDHDIESQTAALAAASNNAQSAFAILSEKCNSVGLDPAGPDFEATLQ
SELTALDKQRTSMTEARTAVTIAQAADEKARNEWEKCRAASGLAAQTARYIEQKLSGIAE
RRSHATETRDRLARSIDARFGGSADWRQLADPAAWLDESAKAWRAHSAEHSRLLAAIPGL
EKSVADARTETATAAARFDEIESQAKGWEADQLRLTNARKIVLGGDTVDIVVARNEAALS
QSRRALEVAQVEASKAREQQAAATAHKESADQEAERRIKDHLDRQGRFHARLAELAIEED
AVADAAQTGQEAIDQEAEALANIERAAEQAAALLTQRQQDLSRHDQTDPPSLSGDALAQA
VSEAKQTDEAAQQALQDAQFVLRRDDEVRTQITKLRADLERERSAARVWLALDELIGDAT
GARFRRFAQGLTLDRLLAHANSRLADLKPRYELQRAPSGDMLIQVIDHDMAGEIRGVHNL
SGGERFLISLALALGLAEMSTGRGLKIESLFIDEGFGALDGASLGQALSVLEHLHATGRR
VGVISHVDEIKERIPVKIEVTPVARGRSELSVISG
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctggcaatccgcggccgtaatctcgcaagcctgagcggcgattttgaagtt
gatttcgaagccgagccgctcagcgacgccggcatcttcgccatcaccggcccgacaggc
gcagggaaatctaccctgctcgacgccatgtgcctggcattgttcgattctgtaccgcgc
ctcggcgcagcaccggcacgcgccaggatcgaaacggcccaaggtgacgagttgtcggca
ggagatcctagggccatccttcggcatggctccggtgagggctatgcggaattggacttc
gtgggccgggacggcgagcgataccgtgctcgatggaccgttcagcgcgcccgtcagaag
accgatggccgcatgcaggccactcggcacaacctcacgcgccttgctgacggcgagatc
ttgggcgggaccaaaactgaaacgctggcggagattcaccgtctcgtcggtttgtcagct
gagcagtttcgtcgggccgtcctcctggcacagggcgatttcgaggccttcatcaaggct
gacgataacgagcgagcccagctactcgaacggctgacggggtcgcatatttatgcgagt
cttggccgcgcagctcatgaaaaggctacgacgatccgggcccagcagcaggcaatccta
gaccgcattgaggcgcagaacggcctcgacgacgaagcacgccagatcgccgaagagcag
cacagtgccgcgaaggacgttgcagatcgcaccgcgtctacgcttggagaactctctaaa
gctgttcgctgggaaagcgatcgtacggccttggccaacaaggtaacggaatgtgagttg
gccgtatcgatcgcgaacaccgcccgcgaagaagccgcccctcggcatgaggcattgcgc
ctgcgtaaagccgcgttcgccctcgcaggagactggaccgccgtccaagacgcagccacg
ctggcgcaggaagcgcgccaaactgttgtcctgcggcaaagtgaatttgagcaggcgagc
gaacgcgcgacacagacggcagctgaagaaagccatgcagcagctcaactccagcttgag
acggaacgggtcgccgctcaatctcctgagatcgaagaagcccgtgtgctcgaccggaag
ctgttcgaaacaaacgcatcgcttgatggcatagcaggcgtccgcgctacgcgcgcgcaa
gccctgtccagatgtcgggagcttgagcaggccgccaacatcttgttggcagaggctgca
gaaactcgtgacggccaggcatcgtggcttgcggcgaacgccgggcttgccacattggct
gcacaggagcaggaactcgctgcagagctcgtcgagatcgcagccgtcgatataaagctg
tccgagctttcagagagcgtaaaggaagcagaggcctccaaaatagaggccaacgccaca
tgggaagccgccaaggcagcggaagagggaaccgccgcagctgccacatgggctcgcaat
atattggacgaggctaaggcatcagcaccatccgatgccgccttctcagcgatcattgaa
aaacgggatcgcctgggaggtctttcccctctcctagtagattggaagcatcaagaagct
caggtagaaacatcccgtgatctcctggtccgtctacgcagcaatctcgatgacgctaag
gccgaacgcaaagatctggtcgtccggcattcccaggtcagctcctcccttcctattctg
cgagcgcaattgcaggaggcacggcgtgccggcgagctagccgaaacggcctcgggcgaa
gcggcaatgcaacttcgcgcaacactcgaggacggtcaggcctgcccggtttgcggggcg
accgaacatgcgttgagtgcgatcgactcgctcttgggcctacagcttcgggagcagcgg
gagcgcatcgcccagctggacgcctcactgtcttcaaagaccgctgaagaggccgccctg
gccgcagggatccaggctactgaccagtcaatcctccggctggaccacgacatagaaagt
cagaccgctgcattggctgcggccagcaataatgctcaatctgcctttgccatcctgtca
gaaaagtgcaactcggtgggccttgatccggccgggccagatttcgaagctactctgcaa
agtgaactcaccgcgctcgacaagcagcgcacttcgatgacggaggcgaggaccgcagtc
acaattgcgcaggccgccgatgaaaaggctcgaaacgagtgggagaaatgccgcgcagcc
tccggtctcgccgctcagacagcgcgctatatcgaacagaaattgagcggcatagcggag
cgacgatcgcacgctacagaaacacgagatcggctcgcgcgatcgatcgacgctaggttc
ggcggcagcgcagattggcgacagttagctgaccccgcagcctggctcgacgaatctgcc
aaggcttggcgcgcccactctgctgaacattcacggcttctcgccgcaattccggggttg
gagaaatcggttgctgacgcgcgtacagagaccgccacagccgccgcccgattcgatgaa
atcgagtctcaagcgaaggggtgggaggcagatcagcttcggctaacgaacgctcggaag
atcgtgcttggcggcgacacggtggatatcgtcgtcgcccgcaacgaagcggccctatcg
cagagccgccgagctttggaagttgcccaagtagaggccagcaaggcgcgagagcagcag
gcggccgcaaccgctcacaaagagtccgcggaccaagaagcagagcgcaggatcaaggac
catctggatcgccaaggtcgatttcacgcacgccttgctgagttggcgatcgaagaagac
gccgtcgccgacgcagcgcaaacgggacaggaggccatcgatcaggaggctgaggctctt
gccaacatcgagagggccgcagaacaggctgctgccctccttacccaacgacagcaggat
ctgagccgccacgaccagacagaccctccttccctgtccggcgatgcccttgctcaggca
gtcagcgaagccaaacaaactgacgaggcggcccagcaggcgctccaagatgcccaattc
gtgctccgccgggatgatgaggttcggacgcagattacgaagcttcgtgccgacttggaa
cgtgagcgctcagcagcgcgggtatggctcgcccttgatgaactcatcggcgatgcgacg
ggcgctcggttccggcgctttgcccaagggctgacgcttgatcgcctgctggcgcacgca
aattcgaggctggcggatctcaagccccgctatgaactccaacgcgcccccagtggcgac
atgcttatccaggtcatcgaccatgacatggctggcgaaatccgtggggttcacaatctt
tcaggcggcgagcgtttcctgatcagtcttgccttggcactcggccttgccgagatgtcg
accggccggggcctcaagatcgaaagtctgttcatcgatgagggctttggcgcactggac
ggcgccagccttggccaagccctgtccgtcttggaacatcttcatgcgaccgggcgccga
gtgggcgtcatcagccatgtcgacgaaataaaagagcggattcccgtgaagattgaggtg
acgcccgtcgcccgtggtcgtagcgaactatctgtgatcagtggatag
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