Sphingobium sp. EP60837: EP837_01874
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Entry
EP837_01874 CDS
T04432
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphb03016
]
EP837_01874
Enzymes [BR:
sphb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EP837_01874
Transfer RNA biogenesis [BR:
sphb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EP837_01874
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
ANI78286
UniProt:
A0A173KWB9
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All DBs
Position
1:1919153..1919761
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AA seq
202 aa
AA seq
DB search
MRRIRTYSEHITNQKDQRCATMRTKALYRPFFALQTSPVIARQIDYLAESLANGARRILP
EHQHMTLAITADYDDYPYAVIKALLRAGTTIMAEPFDLPLDRLSFSNRSAALRPSSSLPL
LNALQRSIIDAMRGAGVMLRPGWSFSPRQTLFYRNGPPEQRRIEGFHWRVEQFALLCSHV
GQTRHETLGTWPLTGDGQYSLF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaataagaacatatagcgaacatatcacgaatcaaaaggatcagcgatgcgcc
acgatgcgcaccaaagccttgtaccggccgttctttgcgctccagacttcgccggtgatt
gcacggcagatcgactatctggcagaaagtctggccaatggggcgcgccggattttgccg
gagcatcagcatatgaccttggccattacagccgattatgatgattatccctatgcagtg
atcaaggcactgctgcgcgcgggaacgaccatcatggcggaacctttcgatctgccgctt
gatcgtttgagcttcagcaatcggtcggctgcattgcggccgtcatcctccctgccactg
cttaacgcgttgcagcggtcgatcatcgacgcgatgcgcggggcaggggtgatgctgcgc
cccggctggagcttcagtccgcgtcagacactattctatcgtaacgggccgcctgagcag
agaaggatcgaaggctttcactggcgggtggagcaattcgcgttgctgtgcagccatgtc
ggccaaacgcggcatgagactttgggaacatggccgctcacaggagacgggcaatattcg
ctgttttag
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