Sphingobium sp. EP60837: EP837_01928
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Entry
EP837_01928 CDS
T04432
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EP837_01928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_01928
Enzymes [BR:
sphb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EP837_01928
DNA repair and recombination proteins [BR:
sphb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EP837_01928
Prokaryotic type
EP837_01928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANI78338
UniProt:
A0A173KW39
LinkDB
All DBs
Position
1:complement(1972297..1973004)
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AA seq
235 aa
AA seq
DB search
MTAMIKLDESWRAPLREEFDRPYMQALKQFLAEEKASGKRIFPKGSEYFRALDLTPLDKV
KVVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIYKELKSDLGLTPPRHGFLEHWAQQ
GVLLLNSVLTVEMGRAASHQKRGWEEFTDAIIRLVNSQAEPVVFLLWGAYAQRKAAFVDE
TRHLVLKAAHPSPLSAHNGFLGCRHFSKANAFLEAKGRGAVDWALPECEVGVSGL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaatgatcaagctagacgaaagctggcgcgcgccgctgcgcgaggaattcgac
cgcccctacatgcaggcgctcaagcagtttctggcggaggagaaagcgtcgggaaaacgc
atcttccccaagggcagcgaatatttccgcgcgctcgacctgacgccgctcgacaaggta
aaggtcgtgatattggggcaggacccctatcatggcgaggggcaggcgcatggcctgtgc
ttcagcgtgcagccgggggtgcggacgcccccgtcgctggtcaatatctacaaggaattg
aagagcgacctgggcctcacgccgccgcgccatggatttctggagcattgggcgcagcag
ggggtgctgctgctgaacagcgtgctgacggtggagatgggccgggcggcatcgcatcag
aagcggggctgggaagagtttaccgacgcgatcatccggctggtcaacagccaggcggag
ccggtcgtgttcctgctgtggggtgcctatgcccagcgcaaggcggcatttgtcgatgag
acgcggcatctggtgctgaaggcggcgcatccttcgccgctgtctgcgcataacggcttt
ttggggtgccggcatttttcgaaggccaacgcctttctggaagcgaaagggcgcggggcg
gtggattgggctttgccggaatgtgaggtgggggtgagcggcctttag
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