Sphingobium sp. EP60837: EP837_02090
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Entry
EP837_02090 CDS
T04432
Symbol
gmdS
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00051
Fructose and mannose metabolism
sphb00541
Biosynthesis of various nucleotide sugars
sphb01100
Metabolic pathways
sphb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
EP837_02090 (gmdS)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EP837_02090 (gmdS)
Enzymes [BR:
sphb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
EP837_02090 (gmdS)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
ANI78495
UniProt:
A0A173KYZ7
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Position
1:2142270..2143424
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AA seq
384 aa
AA seq
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MVNSAHRVEAERTRVRKGTIMQKNGKVALITGVTGQDGAYLSALLLSKGYIVHGIKRRAS
LFNTVRIDHLYRDPHEEDVRFFLHHGDVTDSSNLIRVIQQVQPDEIYNLAAQSHVAVSFE
EPVYTANSDALGTLRLLEAIRILGLEKRTRFYQASTSELFGQVRETPQTEQTPFYPRSPY
GVAKLYAYWITVNYREAYGLYACNGILFNHESPLRGENFVTRKITRALARIKLGLQETLY
LGNLSARRDWGHAKDYVEAMWRMLQLDLPEDFVIATGVQHSVRDFVTSAAAELGIVMRWE
GDGLEEKGYDEKGRCLVRVDPRYFRPAEVETLLGDAAKARKLLGWSPATSFDNLVREMVL
EDLRTAQRDQLVKRHGFQVHDHHE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggttaattcagcccatcgtgtcgaagccgaacgaacgagggtgcgcaaggggaccatc
atgcagaagaatggcaaagttgcattgatcactggtgttaccggccaggacggagcctat
ttgtcggcacttttgctgtccaagggttacatcgttcatggtatcaagcggcgcgcctcg
ctcttcaatacggtccgcatcgatcatctttatcgcgatccccacgaagaagatgtcagg
tttttcctgcatcatggcgatgtgactgactcaagcaatttgattcgggtcatccagcag
gtacagcccgacgaaatctacaacttggctgcacagagccatgtcgccgtttcgttcgag
gagccggtctataccgctaattctgatgcgctgggtacgttgcggcttttagaagctata
agaattttgggtctggaaaaacgtactcgcttttaccaggcatccacttccgagttgttc
ggtcaagtacgtgagacgccccagacagaacaaacacccttttacccgcgatcgccatat
ggcgtggcgaagctctatgcttattggataactgtaaattacagagaggcctatggcctc
tatgcttgcaacggaattttgttcaatcatgagtcgcccctgcgcggagagaatttcgtc
acgcgaaaaatcactcgggcactggcgcggataaagctcggtcttcaggagacgctttat
ctcggcaatttgagcgccagacgagattggggacacgcgaaggactatgtcgaagccatg
tggcgcatgctgcagctcgacttgccagaggatttcgtgatcgccactggagttcagcat
agcgtccgcgactttgtaacctcagcggccgccgaactcggtatcgtgatgcgttgggaa
ggcgatgggctcgaagaaaaaggatacgatgaaaagggccgctgtctcgttcgagtagat
cctcgctatttccgcccagctgaggtcgaaaccctgctgggcgatgcagcaaaggctcgc
aaacttttaggatggagtcctgcgacgtccttcgacaatctggttcgcgaaatggtcttg
gaggaccttaggacggcgcagcgggaccagttggtcaaaagacatggctttcaggttcat
gaccatcacgaataa
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