Sphingobium sp. EP60837: EP837_02512
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Entry
EP837_02512 CDS
T04432
Name
(GenBank) putative L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphb01002
]
EP837_02512
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphb01011
]
EP837_02512
Peptidases and inhibitors [BR:
sphb01002
]
Cysteine peptidases
Family C82
EP837_02512
Peptidoglycan biosynthesis and degradation proteins [BR:
sphb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EP837_02512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ANI78910
UniProt:
A0A173KYW6
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All DBs
Position
1:complement(2559064..2560518)
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AA seq
484 aa
AA seq
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MNRPDLIRFCVAPLLGLAAAPALAQPPAVAPTLPAPAPPVIAPPALVTPPPVPIPTPSAA
QQVWLNNWLKGGAEQGLMARSKATSSLASDALISAVLDRAKALSTGRVDTADFLNIWALR
PAAFDPRPGLARAIAEDRLPQWAAGLTPPYSGYDGLRRGLSNYERIRDAGGWPVLTAKSA
PDAVRKRLAIEDKTVQPGEKLVDALQRAQRRYGLNPTGLLDARTLKELNVPVEDRIGAIM
ANMERWRWMPRQLPVNRVQVNIAAAVLTVFEGDQPVTSMRAVTGAPDNATPMLTSSIHSI
VVNPPWNVPSSIAKKELWPKGRTALLRQGYKIVGTLETGERIVQPAGPSSALGRLKFDFN
NPFAVYLHDTPARAKFSSYDRLASHGCIRLEKPVPLAELMLQDDPKLSGQVQSLIDTGKT
QRVQLPKEVAVYLLYWTAFSSSNGTMNFRSDPYGWDKLLAQKIEASSRRLDPMAAPAATI
ASKD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcccgatttgatccgtttctgcgtcgctcccctgctcggccttgccgccgcg
ccagctttggcacagccacccgccgtcgcgccgaccttgcccgcgcccgcgccgccggtg
atcgcgcccccggccttggttacgccgccgccggtgccgatcccaacgccatcggctgca
cagcaggtctggctcaacaattggctgaagggcggcgcggaacaggggctgatggcgcgc
agcaaggcgacgagctcacttgccagcgacgcgctgatctccgccgtgctggacagggcc
aaggcgctcagcaccgggcgggtcgataccgccgacttcctcaacatctgggcgctgcga
cccgctgccttcgatccccgccccggccttgcccgcgcgatcgccgaagatcgcctgccg
caatgggccgctggtctgacgccgccctattcgggctatgacggtctgcgccgtggcctc
tccaattatgagcggatacgcgatgctggcggctggcccgtgctgacggcgaagtcggcg
cccgacgcggtccgcaagcggctcgccatcgaggataagaccgtccagcccggcgagaag
ctggtggatgccctgcagcgggcgcagcgccgctacgggctcaatcctaccggcctgctc
gacgcgcggacgctgaaggagctgaatgttccggttgaggatcgcatcggcgcgatcatg
gcgaatatggagcggtggcgctggatgccgcgtcagttgccggtcaatcgcgtgcaggtg
aacatcgccgccgccgtcctcaccgtgttcgaaggcgaccagccggttacgtcgatgcgg
gcggtaacgggggcccccgacaatgcgacgccgatgctgacatccagcatccattcgatc
gtcgtcaatccgccgtggaacgtcccctcctccatcgcgaagaaggaactgtggcccaag
ggccggaccgccctgctgcggcagggatacaagatcgtcggcaccctggaaaccggcgag
cggatcgtgcaacccgccgggccaagcagcgcgctcgggcggttgaagttcgacttcaac
aatcccttcgccgtctatctgcacgacacgcctgcccgcgcgaaattttcgagctacgac
cggctcgccagccatggctgcatccgtctcgaaaagccggtgccgttggccgaactgatg
ctgcaggacgacccgaagctgtcgggccaagtgcagtcgctgatcgataccggcaagacg
cagcgtgtgcagttgcccaaggaagtggcagtctatctgctttactggaccgctttttcc
agcagcaacggcacgatgaatttccgttccgacccctatggctgggacaagctgctcgcc
cagaagatcgaggcgtcgagccgccgactggaccccatggctgcccctgcggccaccatc
gcttcgaaggattaa
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