Sphingobium sp. EP60837: EP837_02879
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Entry
EP837_02879 CDS
T04432
Name
(GenBank) UvrABC system protein
KO
K03701
excinuclease ABC subunit A
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP837_02879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_02879
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP837_02879
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EP837_02879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_29
AAA_21
DnaJ_CXXCXGXG
AAA_16
AAA_25
DUF4350
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ANI79273
UniProt:
A0A173L1S6
LinkDB
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Position
2:complement(244623..247163)
Genome browser
AA seq
846 aa
AA seq
DB search
MRDTKAPGFVRVRGAREHNLKNVDVDIPRDALVVFTGVSGSGKSSLAFSTLYAEAQRRYL
ESVSPYARRLFHQMEVPEVDQIEGLPPAVALQQQRGSPTTRSSVGSVTTLSNLLRMLYSR
AGDYPRGQAHLEAEAFSPNTLEGACPRCHGLGRIHEVTEASMVPDPSKSIRERAVAAWPM
AWGGQNLRDILISLGVDVDTPWRDLPKKVRNWILFTEEQPQVPVYPGWSHDQIQRAIRRK
TEPAYMGTFSSAKRHVTHSYATTQSSMMKKRAARFMIARLCPVCDGKRLRRESLSVRFEG
LDLAEMSHLPMARFSKIFAPYAEAKAGKLSALRKTHPEKALVVEHIASDLCRRLSVLLDL
GLGYLTLERSTPTLSPGELQRLRLATQVVSNLFGVVYVMDEPSAGLHPADTEALLRALEG
LKAVGNSLFVVEHEMDVVRRADWIVDVGPAAGEHGGEILYSGPIEGLRAVAASETRRHLF
DEGSGMPSRAREPAGWLRMEGVSRNNLKQVDCAIPLGVMTTVTGISGSGKSSLVSQALVE
LIAAALGAPGAAADDAEAALEERPAGATEGRIVGGLEGIRRLIEVDQKPIGRTPRSNLAT
YTGLFDHVRALFAATPEARKRRYDAGRFSFNVAKGRCPRCEGEGFVMVELLFLPSVYAPC
PTCHGTRYDPKTLEIRYRGKTVAEILALTVEGAWEFFDDAPNVCRSLKVLREVGLNYLRL
GQPATEFSGGEAQRVKLATELQRAQRGGALYVLDEPTTGLHPTDVERPLGQLQALVDAGN
SVVLVDHDMKVAAASDWVIDIGPGAGDEGGRIVASGPPTNVSACPESRTAPYLYRALGER
PVAVAT
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataccaaggcccccggtttcgtccgcgtacgcggcgcgcgcgagcacaatctc
aagaacgtagatgtcgatataccgcgcgacgctctggtcgtgttcaccggcgtatcggga
tcgggcaagtcgtcgctcgctttctccaccctctatgccgaggcgcagcgccgctatttg
gaatcggtctcgccttatgcgcgccgcctgttccaccagatggaggtacccgaggtggac
cagatagagggcctaccgcccgcggtagcgttgcagcagcagcgcggatcgccgacgacc
cgatcgtcggtcggcagcgttaccaccctctccaacctgctgcgaatgctctactcgcgc
gctggcgactatccgcggggtcaagcccatctcgaggccgaagccttctcgcccaacacg
cttgaaggcgcatgcccgcgttgccacggcctcggccggatccacgaggtcaccgaggcc
tcgatggtgcccgatccttcgaagtcgatccgcgagcgagcggttgccgcctggccgatg
gcatggggcggccagaatctgcgcgacatcctgatcagcctcggcgtcgatgtcgacacg
ccgtggcgggacctgccgaagaaggtgcgcaactggatcctgttcaccgaggagcagccc
caggtcccggtctatcccgggtggagccatgaccagatccagcgcgcgatccggcgcaaa
accgaaccggcctatatgggcaccttctcgagcgcgaaacgccatgtcacccatagctat
gccaccacacagagctcgatgatgaagaagcgcgccgcgcgcttcatgatcgctcggctc
tgcccggtttgcgacggcaagaggctgcggcgggagtccttgtcggtccgcttcgagggc
ctagacctcgccgagatgagccacttgccgatggctcgcttctcgaaaatctttgcacct
tatgccgaggcgaaggccggcaagctcagcgcgctgcgcaagacgcatccggagaaggcc
ctggtcgtcgagcatattgcgagcgatctgtgccgccggctgtcggttctgctagacctc
ggcctcggctatttgacgctggagcgcagcacgccgaccctgtcgccgggtgagctgcaa
cggctgcgccttgctacccaggtcgtctcgaacctgttcggggtcgtctatgtaatggac
gagccgtccgccgggctccacccggctgatacggaggcgctgctccgcgcgctcgaaggc
ttgaaggcggtcggaaattcgctgttcgtggtcgagcacgaaatggacgtcgtccgccgc
gccgactggatcgtcgatgttggtcctgccgccggtgagcacggcggggagattctctac
agtggcccgatcgagggcctgcgcgcggtcgcggcgtcggagacacggcgccatttgttc
gacgaaggcagcgggatgccgagccgggcgcgcgagcctgccggctggctgcggatggag
ggtgtctcgcgcaataatctgaagcaggtcgactgcgcgatcccgctcggcgtgatgacc
acggtcaccggtatctcggggtcgggcaaatcaagcctggtcagccaggcgctggtcgag
ctcatcgccgctgccctcggcgccccgggcgcggccgcggacgatgccgaagccgcgctc
gaggagcggcccgccggcgccaccgagggccgcatcgtcggcgggctcgaagggatcagg
cggctgatcgaggtcgaccagaagccgatcggccgcaccccgcgctccaacctcgcaacc
tataccggcctgttcgaccatgtccgcgccctgttcgccgcgacgcccgaagccaggaag
cgccgttacgatgccggccgcttctcgttcaacgtcgcgaagggccgctgcccgcgctgc
gagggagagggcttcgtgatggtggaattgctcttcctgccgagcgtctatgccccgtgc
ccgacctgtcacgggacccgctacgaccccaagacgctcgagatacgctatcgcggcaag
accgtcgccgagatactcgcgctcacggtcgagggggcttgggagttcttcgacgacgcg
cccaatgtctgccggtcgctcaaggtgcttcgcgaggtcgggcttaactatctccgcctc
ggacagcccgccaccgagttctcgggcggtgaggcgcaacgggtgaagctcgcaaccgag
ttgcagcgcgcgcagcgcggcggcgcgctctatgtgctcgatgaaccgaccaccggcctc
cacccgaccgatgtcgagcgtccgctcggccagctccaagccctggtcgacgccggcaac
agcgtcgtcctagtcgatcacgacatgaaggtggcggcggcgagcgactgggtgatcgac
atcgggcccggcgccggcgatgagggcgggcggatcgtcgccagcggcccgccgacgaat
gtctccgcctgccccgaaagccgcaccgcgccctatctctatcgcgcgctcggcgaacga
ccggtcgccgtggccacctga
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