Sphingobium sp. EP60837: EP837_03457
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Entry
EP837_03457 CDS
T04432
Name
(GenBank) DNA-binding protein HU-1
KO
K03530
DNA-binding protein HU-beta
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphb03032
]
EP837_03457
03036 Chromosome and associated proteins [BR:
sphb03036
]
EP837_03457
03400 DNA repair and recombination proteins [BR:
sphb03400
]
EP837_03457
DNA replication proteins [BR:
sphb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EP837_03457
Chromosome and associated proteins [BR:
sphb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EP837_03457
DNA repair and recombination proteins [BR:
sphb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EP837_03457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_cement_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ANI79841
UniProt:
A0A173L170
LinkDB
All DBs
Position
2:complement(879598..879873)
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AA seq
91 aa
AA seq
DB search
MNNTDLAEAVAAEHGLTKADARKYVDGVFAAIAGAAAKGEEVSLSGFGKFKVKDQPAREG
RNPSTGAAIQIAASKKLTFTPAKAVKDQLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataccgacctcgctgaagccgtcgccgctgaacatggcctgaccaaggccgat
gctcgcaaatatgttgatggtgtgtttgcggccatcgctggcgccgccgccaagggtgaa
gaagtttcgctgagcggttttggtaagttcaaggtcaaggatcagccggcgcgtgaaggc
cgcaatccttcaaccggcgcagctatccagatcgccgcttcgaagaagctgaccttcacg
cctgccaaggcggtcaaggaccagctgaacggctaa
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