Sphingobium sp. EP60837: EP837_03872
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Entry
EP837_03872 CDS
T04432
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
sphb
Sphingobium sp. EP60837
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sphb03000
]
EP837_03872
Transcription factors [BR:
sphb03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
EP837_03872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
AsnC_trans_reg_3
HTH_11
HTH_23
GntR
CggR_N
HTH_36
MarR
Sigma70_r4_2
HTH_29
Fe_dep_repress
Sigma70_r4
NirdL-like_HTH
HTH_5
HTH_50
TFIIE_alpha
HTH_Crp_2
HTH_28
HTH_20
PaaX
HTH_38
HrcA_DNA-bdg
MarR_2
PH0730-like_N
HTH_DeoR
HTH_10
CENP-B_N
HTH_IclR
HTH_12
Rrf2
HTH_34
HTH_PafC
HTH_39
BLTP1_C
TrmB
HTH_6
Motif
Other DBs
NCBI-ProteinID:
ANI80250
UniProt:
A0A173L2Z5
LinkDB
All DBs
Position
pEP1:205110..205676
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AA seq
188 aa
AA seq
DB search
MTDMSQHKLDAIDRRIVDILSHDARVSNRSIAKDLGVTEGTIRQRIKRLQKDGLIQFTVV
TDFRMAGSPNLCMMGIDADPSRVRAIAEQLKRIPEINCVVLLLGRFNILAMGLFTNIEQL
DRVVKAKIRPLPGVQRVETAISVHNLKYEAGVAKIMQRAEQAEGPAPDAASLPSGKATRS
RQRRKVPV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacagatatgagccaacacaagctggatgcaattgaccgtcgaatagtggacatattg
tcgcacgatgcgcgcgtttcgaaccgctcaatcgccaaagacttgggtgttaccgaaggc
accatccggcagcggatcaaacggcttcagaaagatgggctgatccaattcacggtcgtc
accgatttccgaatggccggctcccccaacctttgcatgatgggcatcgacgccgatccc
tctcgtgtgcgcgcaatagcggagcaattgaagcgaattcccgagatcaactgcgtcgtg
ttgctactgggccgcttcaacatcctggcgatgggcctatttaccaacatcgaacagctt
gaccgcgtagtaaaggcaaagatccggcccttacctggcgtgcagcgcgtggaaacggca
atctccgtccacaacctcaaatatgaggcaggcgtcgccaagatcatgcagagagcagag
caggcggaaggccctgctccggatgctgcgtcacttccaagcggcaaggcgacgcgttcg
cgtcaaaggcgtaaagtgcctgtctag
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