Sphingomonas psychrotolerans: CVN68_01690
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Entry
CVN68_01690 CDS
T05307
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_01690 (addA)
Enzymes [BR:
sphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVN68_01690 (addA)
DNA repair and recombination proteins [BR:
sphc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CVN68_01690 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATY30858
UniProt:
A0A2K8MAE3
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All DBs
Position
367859..371287
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AA seq
1142 aa
AA seq
DB search
MGVTEVRALHRLKGNQRRASDPARHIWLSASAGTGKTQVLAARVWRLLLAGTDPGAILCL
TFTKAGAAEMSERITSRLARWVRASDAELVADLEALGESIAPEGRARARTLFAKVLDAPG
GGIRIQTIHSFCQSLLSAFPVEAGLVPGFRPLDQREEAVLAREALAEMLVDAGREGRAGL
IDSVGALSLRLGEGKAEAFLKICASNAEAMARLPSGIQPFLRRAMNLPSGDIAAEIEACC
SDDAFDCAGLRAVAAMNAAWGTKSGLARAEEIAMWLTLPPGKRALRLADLHSVWATAKGE
PRSFGKGQAPQEAGYADLAMRLHGRCGELIGMKMQADFTDLLARGLEAGRAYADTYARAK
RRVGAVDFNDLIRKTVALLAEPGMGEWVRYKLDQVTEHVLIDEAQDTNPQQWAIVSAIAD
EFFAGEGARGEAVRTLFTVGDYKQAIFGFQGTDPIYFRAAFERFWQASRVRADYDVEARE
LESLSLTHSFRSTRPVLEFVDAALGGLPVPGMGDLSDAEPHASEVPGPGTVTLWPATAEG
GSDSDEEEWVGDTTRKLAGDIARAIKRWLAEGLMLESKGRPLHPEDVMILVKRRGELASL
IVARLYAEGVPVAGVDRLRLNAPLAVQDLLAAVRFVLQPEDDLSLASLLVSPLLGWSQED
LMAAALRPKGRSLWSHLRDVARDRIGPLEALLNRADFTTPYRFLEEILSGPLDGRRKLLL
RLGEEARDPIEELLNAALNFENVATPSLQRFLDWFDRGDVEIVRDAAQPAGAVRVMTAHG
AKGLQAPLVILADATVDPTRSPRDFLLWAPEDHDAAPFPIFRPRAAERGGPLDAVLEQAD
RRELQEHWRLFYVAATRAEERLVIAGALGPQAKGVPPAASWYAACARALDALGVPEGEVR
EFRGITPAAPVALMAPRARLEQTTNRLPEWIKQPAPAEARPPRPLAPSSLGEDLAADPPP
TPALRVAAERGRLLHALFERLPALAPDARAHAAERWLAGPGGVEEAGARSEIAAAALAVL
GDPRFAELFAPDALAEAPIAAVVEGLVVSGTVDRLVVGSDIVRVVDFKTARRAPAALDAI
PPYHLRQMAAYAAALAVIFPGKRIEAALLYTAGPTLHVLPAELLAAQKADLVATEQSLGS
RA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgactgaggtccgcgccctccatcgcctcaagggcaatcagcgtcgcgccagc
gatcccgcgcggcatatctggctgtcggcctcggccggcaccggcaagacgcaggtgctc
gcggcgcgcgtctggcggctattgctcgccgggaccgatcccggcgcgattctgtgcctg
acctttaccaaggcgggcgccgccgaaatgtccgagcggatcaccagccggctggcgcgc
tgggtgcgggcgagcgacgccgaactggtcgccgatctcgaagcactgggcgagagcatc
gcgcccgagggacgcgcgcgggcacgcaccttgttcgccaaggtgctcgatgcgccgggc
gggggcatccgtatccagacgatccacagcttttgccagtctttgctctcggcatttccg
gtcgaggcggggctcgtgcccggttttcggccgctcgaccagcgcgaagaggcggtgctt
gcgcgtgaggcactggccgagatgctggtcgatgccgggcgtgaggggcgtgccgggctg
atcgactcggtgggcgcgctcagcctgcggctcggcgagggcaaggccgaagcgttcctc
aagatctgcgcatcgaatgccgaagcgatggcaaggctgccgagcgggatccagccgttc
ctgcgccgcgcgatgaacttgccgagcggcgacatcgccgcggagatcgaggcgtgctgc
agcgacgacgcattcgactgcgccgggctgcgcgcggtcgcggcgatgaacgcggcctgg
gggaccaaatccgggctggcgcgtgccgaggaaatcgcaatgtggctgaccctgccgccg
ggcaagcgcgcgctgcggctggccgacctgcattcggtatgggccaccgccaagggcgag
ccgcgctcgttcggcaaggggcaggcgccgcaggaagcgggctatgccgatctggcgatg
cggctgcatggacgctgcggcgagctgattggcatgaaaatgcaggccgatttcaccgat
ctgctggcgcgcgggctcgaggcggggcgcgcttatgccgacacttatgcgcgggcaaaa
cgccgggtcggcgcagtcgacttcaacgatctgatccgcaagaccgtcgcgttgctcgcc
gagcccggcatgggcgaatgggtgcgctacaagctcgatcaggtcaccgagcatgttttg
atcgacgaggcgcaggataccaatccgcagcaatgggcgatcgtcagcgcgatcgccgac
gagtttttcgcgggggagggcgcgcgcggcgaggcggtgcgcaccttgttcaccgtcggc
gactacaagcaggcgatcttcggcttccagggcaccgatccgatctacttccgcgcggcg
ttcgagcggttctggcaggcttcgcgggtgcgggcggattacgacgtcgaggcgcgcgaa
ctcgaatcgctgtcgttgacgcacagcttccgctcgacccggccagtgcttgaattcgtc
gatgcggcgctgggcggattgccagtgccggggatgggcgacctcagcgacgccgagccg
catgccagcgaagtgccggggccggggaccgtcaccttgtggccggcgaccgccgagggt
ggcagcgattccgacgaggaggagtgggtgggcgacaccacgcgcaagctcgccggcgac
attgcgcgggcgatcaagcgctggctcgccgaggggctgatgctcgagagcaagggccgg
ccgctgcatcccgaggacgtgatgattctcgtcaagcggcgcggcgagctcgcctcgctg
atcgtcgcacggctctatgccgagggggtgccggtagcgggggtcgaccggctgcggctc
aacgcgccgctggcagtgcaggacttgctcgccgcggtgcgtttcgtgttacagccggag
gacgatctgtcgctggcgtctttgttggtctcgccgctgctcggctggagtcaggaggat
ctgatggccgcggcattgcggccgaagggcaggtcgctgtggtcgcaccttcgcgatgtc
gccagggaccggatcggcccgctggaggctttgctcaatcgcgccgacttcacgacgccc
tatcgcttcctcgaggagatcctttccgggccgctcgacgggcgtcggaagctgctgctg
cggctgggcgaggaagcgcgcgatccgatcgaggaattgctcaacgccgcgctcaatttc
gagaatgtcgcgacaccttcgctccagcgcttcctcgactggttcgatcgcggcgatgtc
gagatcgtccgcgacgcggcgcagccggcgggggcggtgcgagtgatgaccgcgcacggt
gccaaggggctgcaggcgcccttggtgatcctcgccgacgcgaccgtcgacccgacgcgc
tccccgcgcgatttcctgctctgggcgcccgaagaccatgacgccgcgccgtttccgatc
ttccggccgcgcgcggcggagcgcggcgggccactcgacgcggtgctggaacaggccgac
cggcgcgagctgcaggaacattggcggttattctatgtcgcggcgacacgggcggaggag
cggctggtgatcgccggcgcgcttgggccgcaggccaagggcgtgccgccagcggccagc
tggtacgccgcatgcgcgcgcgcgctcgatgcgctgggggtacccgaaggggaggtgcgc
gaattccggggaattacgccggcggcgcccgtcgcattgatggctccccgggccagactc
gaacagacgaccaatcgactgcccgaatggatcaagcagccggcgcccgccgaggcgcgg
ccgccgcggccgctcgcaccgtcgtcgctgggcgaggatctggccgccgatccgccgccg
acgccggcgttgcgcgtcgccgccgagcgcgggcgattactccacgcgctgttcgagcga
ttgcccgcgctggcgcccgatgcgcgcgcccatgccgccgaacgctggctcgccggaccg
gggggcgtggaggaagcgggcgcgcggagcgaaatcgccgcggcggcgctggcagtgctc
ggggatccgcgcttcgccgaattgttcgcgcccgatgcgcttgccgaggcgccgatcgcg
gcggtggtcgaggggctggtggtctcgggaacggtcgatcggctggtggtcgggtccgat
atcgtgcgcgtggtcgacttcaagacggcgcggcgggcgcccgccgcgctcgacgccatc
ccaccttatcatttgcgccagatggcggcctatgccgcggcgctggcggtgatctttcca
ggcaagcgaatcgaggcggcgctgctctacaccgcgggaccgacgctccacgtgctgccg
gcggaattgctcgcggcgcaaaaggccgacttggtcgcaacggagcaaagcttgggctcg
cgcgcttga
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