Sphingomonas psychrotolerans: CVN68_02250
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Entry
CVN68_02250 CDS
T05307
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
sphc
Sphingomonas psychrotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
Viral_helicase1
TraI_hel_assoc_N
SH3_13
PIF1
Herpes_Helicase
AAA_11
UvrD_C_2
AAA_22
DUF2442
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATY30953
UniProt:
A0A2K8MAR1
LinkDB
All DBs
Position
519098..522121
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AA seq
1007 aa
AA seq
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MAIYHFSAKIISRANGSSALASAAYRSASRLHDQRLDRHHDFSNKAGVVHSEVLLPDGAP
EQFRDRETLWNAVEQAELRKDAQLSREVEFAIPRELEQAEGIRLAREFVEREFVARGMVA
DLNVHWDIGADGGPKPHAHVMLTTRDVDENGFGKKNRDWNRTELLENWRERWAEHVNERL
VELDIDARVDHRSLEAQGIDLEPQHKIGPAASRMAAKGLQLERVDEHREIARSNGAKIIA
SPGLALDAITRNQATFTTRDLAMFVHRHTEGKDQFDRVMAAVRGSPELVTLGKDGRGADR
FTSRDMIETEQRLARATQALAERERHRVTDRDRERAVANAERRGLLLSAEQRSAFERVTG
ANDLGVVVGYAGTGKSAMLGVARDTWESAGYQVQGLALSGIAAENLESGSGIASRTIASL
ERQWGQGRERLTPDHVLVIDEAGMIGSRQMERVIAEAEKRGAKVVLVGDPEQLQAIEAGA
AFRSVAERHGSVEVTDIRRQREDWQREATRHLATGRTAEALDPYRDAGMVVESETRAAAR
EALIDRWDGDRTSDPAHSSIILTHTREECDELNGLARDRMKRNGTLVADIAVKTSRGERL
FAADDRIMFLRNERELGVKNGSLGTVEQIDPSRMAVRLDDGRHIAFDLKDYSDVTHGYAA
TIHKAQGVTVDRVHVLATPGLDRHAAYVALSRHRDAVHLHYGRDDFADGDRLARTLSRDR
PKDNALDYEQSTTRFAERRGFDRSAILDALAREPLVDGAHTAPEPERRRGRFAGLRLRVP
AADVEQKRGRFDGLKLPTAAQPQPVERGSGLAAAVQRYARAVQDIGRMTGQGLPALEYQK
AARAQAAQALDVVQKDGARDLNAAFEREPGLVSEAANGRAANAMRQMQLETELRTNPELR
ADRFVQTWQQLRSQREKLEGWQNEQARDAVENRMRAMAKGLEKDPALGAALSSRGSQLLG
RQWSPEWSPGSRDGGIGAAIGDQARTRSVIQQLTFSIDRRRNLGIGL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctaccacttctcggccaagatcatctcgcgcgccaacgggtcgtcggcgctg
gcgtccgcggcctatcgctctgcctcgcggttgcacgatcagcggctcgatcgccatcac
gacttctcgaacaaggcgggcgtcgttcactcggaagtgctgctgccggacggcgcaccg
gagcagttccgcgatcgggaaacgctatggaatgccgtcgagcaggccgagctgcgcaag
gacgcccagctctctcgtgaggtggagttcgcgattccgcgcgagctggagcaggccgag
ggtatccgactggctcgcgagttcgttgagcgggagttcgtcgcgcgcgggatggtcgcc
gatctcaatgtgcattgggacatcggcgcagatggagggcccaagccgcatgcgcacgtg
atgctcaccacgcgtgatgtcgacgagaacggcttcggcaagaagaaccgcgactggaat
cgcaccgagcttctggagaactggcgcgagcgctgggccgagcacgtcaatgaacggctg
gtcgagctggatatcgatgcgcgcgtcgatcatcgctcgctggaagcgcagggcatcgac
ctcgagcctcagcacaagatcggcccggctgcatcgcggatggcggcgaaggggctgcag
ctcgagcgcgtcgacgagcatcgcgagattgcccgctcgaatggcgcgaagatcatcgcc
agccctggacttgcgctcgatgcgatcacccgcaaccaggcgaccttcacgacgcgcgat
ctcgccatgttcgtgcaccggcataccgagggaaaggaccagttcgatcgtgtgatggcc
gcggtgcgcggctcgcccgaactggtcacgctcggcaaggacgggcgcggcgcggaccgt
ttcaccagccgcgacatgatcgagaccgagcagcggcttgcgcgcgcaacacaggcgctg
gccgagcgcgaacggcatcgcgtcacagaccgggaccgtgaacgcgccgtcgctaatgcc
gaacggcgcggcctcctgctttccgccgagcagcggtcagcgttcgagcgtgtgactggt
gccaatgatctcggcgtcgtggtcggctacgccggcaccggcaagtcggcaatgctcggc
gtcgcgcgagatacatgggagagcgccggctatcaggtgcagggcctcgcgctctccggc
atcgccgccgaaaatctggagagcggctcaggcattgcctcacgcacgattgcgagcctc
gaacgccagtgggggcagggccgcgagcggctgacgcccgatcacgtgctggtgatcgac
gaggctggcatgatcggctcacggcagatggagcgcgtgattgccgaagccgagaagcgg
ggtgccaaggtggtgctggtcggcgatcccgagcagctgcaggcgattgaggccggcgcg
gcgttccgctcggtcgccgagcgccacggcagtgtcgaggtcacggatattcgccgccag
cgcgaagactggcagcgcgaagccacgcgccatctcgccaccggccgtaccgcggaagcg
ctggacccctatcgcgacgcgggaatggtggtcgagtcggagactcgcgcagctgctcgg
gaagcgctgatcgaccgctgggacggcgaccgcaccagcgatccggcgcactcttccatc
atcctgacgcatacccgcgaagaatgcgacgaactgaatgggctggcccgggatcgaatg
aaacggaacgggacgttagttgctgatattgctgtaaaaacatcacgcggcgagcgcttg
tttgcggccgatgaccgcatcatgttccttcgcaacgaacgcgaactgggcgtgaagaat
ggctcccttggtaccgtcgaacagatcgatcccagccgcatggcagtgcggctcgacgat
ggccggcacatcgccttcgacctcaaggattattcggatgtcacccacggttacgccgcc
accatccacaaggcgcagggcgtcaccgtcgatcgcgtccatgtgctggccacacccggg
ctcgaccggcacgcagcctatgtcgcgctgtcccgccaccgtgacgcagtccatcttcac
tatggccgcgacgactttgcggatggcgaccggctcgcccgtacgctgtcgcgcgaccgg
ccgaaggacaacgcgctcgattacgaacagagcacgactcgatttgccgagcggcggggt
ttcgaccggtctgcgatcctcgatgcgcttgcgcgggagccgttggtcgacggcgcccat
accgcgccggagccagagcgacgtcgcggcaggttcgcgggcctacgcctgcgcgtgcct
gctgccgatgtggagcaaaagcgcgggaggtttgacgggctcaagctgccgacggcagcc
cagccgcagccggtggagcggggtagcggacttgccgccgccgtccagcgctatgcccgc
gctgtgcaggacatcggtcgcatgaccgggcagggtctacccgcccttgagtatcagaag
gccgcccgagcgcaagcagcacaggcgctggacgtggtgcagaaggacggcgcccgcgat
ctcaacgcggcattcgaacgcgaacccggattggtcagtgaggccgccaatggccgagcc
gccaacgctatgcgccagatgcagcttgagactgagctgcgcaccaatcccgagctgcgc
gctgaccggttcgtgcagacgtggcagcagctcaggagccagcgcgagaagctggagggc
tggcaaaatgaacaggcgcgcgacgcggtcgagaaccgcatgcgagcgatggcgaagggg
ctggagaaggatccggcgctcggcgctgcgctcagcagccggggcagccagctgctcggt
cggcaatggtctccggaatggtcgccgggtagccgggacggcggcatcggcgcggcgatc
ggcgatcaggcccgcacgcgatcggtaatccagcaactgacgttctcgatcgatcgaagg
cgcaacctcgggatcgggctatga
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