Sphingomonas psychrotolerans: CVN68_02310
Help
Entry
CVN68_02310 CDS
T05307
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc03410
Base excision repair
sphc03430
Mismatch repair
sphc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVN68_02310 (recJ)
03430 Mismatch repair
CVN68_02310 (recJ)
03440 Homologous recombination
CVN68_02310 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_02310 (recJ)
DNA repair and recombination proteins [BR:
sphc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CVN68_02310 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CVN68_02310 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CVN68_02310 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ATY30963
UniProt:
A0A2K8MAS1
LinkDB
All DBs
Position
complement(535788..537554)
Genome browser
AA seq
588 aa
AA seq
DB search
MTAVLNIHRSILGQPWRWRGLAADARDSNFAPDDIVTQLLLTRGCSRETLDDHRAPSIRA
FMPDPSIFRDMDKAAERIADAVETGEQVAIFGDYDVDGATSAALLILLLRDLGLEARPYI
PDRLMEGYGPSGEALVRLHSEGASLIVTVDCGAQAFEALQMAKDAGADVIVCDHHKCAAE
LPVAHAVINPNRLDEGEGAAHGHLAAVGVAFLLGAALIRTLRARGWFKACPEPRLLDLLD
LVALGTVADVAALKGLNRAFVAQGLKVMGQRRNIGMNALIEASRLTRAPTCTDLGFALGP
RINAGGRVGRSDLGVRLLTTRDPEEARVIAVELDLLNEERRAIEAEVQLAAEDLCLAKDN
RAVVIVASRGWHAGVIGIVAGRLKEKLGRPAIVIALDEDGVGKGSGRSIPGVDLGAAVLA
AKDAGLLHAGGGHAMACGVTIAEDRLEAFADFLEERLAGRVTAAMGERALLLDAVLAPGG
VNPALVTAMEAGGPYGMGWPAPRVVAGPITVLKADVVGSGGHVRVIVAGDDGRSLKAVAF
RQAETELGAALLSAPRHRKLWLAGRARIDDWGARPAAELHIEDAAWVD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtactcaacattcaccgctcgatcctcggtcaaccctggcggtggcgcggg
ctggcggcggacgcacgcgattcgaacttcgcccccgacgacatcgtcacccagctgctg
ctcacgcgcggctgttcgcgcgaaacactcgacgatcatcgcgcacccagcatccgcgcc
ttcatgcccgatccctcgatcttccgcgacatggacaaggccgccgaacgcatcgccgac
gcagtcgagacaggcgagcaggtcgccatcttcggcgactatgacgttgacggcgccacg
tcggcggctttgctcatcctgctgctgcgcgacctcgggctcgaggcccggccctatatc
cccgaccggctgatggaaggctatgggccgtcgggcgaggcactggtccggctccacagc
gaaggcgcgagcctgatcgtcaccgtcgattgcggcgcgcaggcgttcgaggcactccag
atggccaaggatgccggcgccgacgtgatcgtctgcgaccatcacaaatgcgccgcggaa
ttgccggtggcgcatgcagtgatcaaccccaaccggctcgacgaaggcgaaggcgccgca
cacggccatctcgccgcggtcggcgtcgcattcctgctcggcgccgcgctgatccgcacg
ctccgcgcgcgcggctggttcaaggcatgccccgagccacgcctgctcgatctgctcgat
ctggtcgcgctcggcaccgtcgccgacgtcgcggcgctgaaaggcctcaatcgcgccttc
gtcgcacagggcctcaaagtcatggggcagcgccgcaacatcggaatgaacgcgttgatc
gaggcgtcacgcctcacccgcgcgcccacctgcaccgatctcggcttcgcactcgggccg
cggatcaacgccggcggccgggtcggacgttccgatctcggggtgcgcctgcttaccacg
cgcgatcccgaagaagcccgcgtgatcgccgtcgaactcgacctgctcaacgaggagcgc
cgcgcgatcgaggccgaggtccagctcgcggccgaagatctgtgcctcgccaaggacaat
cgcgccgtggtgatcgtcgcgagccgcggttggcatgccggggtgatcggcatcgtcgcc
gggcggctcaaggagaagctcggccgcccggcgatcgtcatcgcactcgacgaggacggc
gtcggcaagggttcggggcgctcgatccccggcgtggatctgggcgcggcggtgctggcc
gccaaggacgcggggctgctccatgcgggcggtggccatgcaatggcgtgcggagtcaca
attgccgaggaccggctcgaagcctttgccgatttcctcgaggagcgcctcgccgggcga
gtcaccgcggcgatgggcgagcgcgcattgctgctcgatgccgtgctcgcgcctggcgga
gtcaatcccgcgctggtcactgcgatggaggccggcggcccctatggcatgggctggccc
gcgccacgcgtcgtcgccggtccgatcaccgtcctgaaggccgacgtggtgggttcgggc
gggcatgtccgggtcatcgtggcgggcgacgatggccgcagcctcaaggccgtcgccttc
cgtcaggccgaaaccgaactgggcgccgctttgctttcggcaccccgccaccgcaagctg
tggctcgccggaagagcccggatcgacgattggggcgcccgcccggcggcggaactccac
atcgaagatgccgcctgggtcgattga
DBGET
integrated database retrieval system
