KEGG   Sphingomonas psychrotolerans: CVN68_03975
Entry
CVN68_03975       CDS       T05307                                 
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
sphc  Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:sphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphc03019]
    CVN68_03975
Messenger RNA biogenesis [BR:sphc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CVN68_03975
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_22 ZSWIM1-3_C Rad17 AAA_16 AAA_29 T2SSE ABC_tran AAA_33 AAA_18 AAA_30 AAA_28 AAA_27 Herpes_Helicase FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ATY31241
UniProt: A0A2K8MJ64
LinkDB
Position
complement(916361..917299)
AA seq 312 aa
MSRRRPRQILLVTGMSGAGKSTALRTLEDLGWETVDNLPLLLLHRLLDTPPGEGADGDDD
RPLALGIGTQTRGFDAESIVQRVKKLSEQEGHEVGTLFLECAGAELERRYSETRRRHPLA
QDRPASDGIARERELLMPLRRWSNRLIDTTDLSSNELQQQIRSTFSGDGLGRTVLTITSF
GFARGLPRDADLVFDMRFLRNPHWVEALRPGTGQHVDVSTYIADDPAYGQAMAQIEALLL
LLLPRYQAEGKAYVTAAFGCTGGRHRSVHVAERMARRLREEGFSPTVTHRDLQTAPQDSL
EGAPVTISGGGV
NT seq 939 nt   +upstreamnt  +downstreamnt
gtgagccgaaggcggccgagacagatcctgctcgtcaccggcatgtcgggggcgggcaaa
tcgaccgcgcttcggacgcttgaggatctcggctgggagaccgtcgacaatcttcccctg
ctcctgctccaccgactgctcgacacaccgcctggcgaaggcgccgatggcgacgacgac
cggccgctcgcgctcggcatcggcacccagacccgcggcttcgacgccgagagcatcgtc
caacgtgtcaagaaactcagcgagcaggaagggcacgaggtcggcacgctgttcctcgaa
tgcgcgggcgccgagctcgagcggcgctattcggagacgcggcggcgccacccgctggcg
caagatcgccctgccagcgacggcatcgcccgcgagcgcgaattgctgatgccactccga
cgctggtcgaaccggctgatcgacaccaccgacctctcctcgaacgagctgcagcagcag
atccgctcgaccttctcgggcgacggtctggggcgaacggtgctcaccatcacctccttc
ggttttgcgcgcgggctgccgcgcgacgccgacctcgtgttcgacatgcgtttcctgcgc
aatccgcattgggtggaggcgttgcgtcccgggacgggccagcacgtcgacgtctctacc
tatatcgccgacgatcccgcttatggacaggcgatggcgcagatcgaagcgttgctcctc
ctcctgctgccgcgataccaggccgaaggaaaggcatatgttaccgccgcattcgggtgt
actgggggccgccatcgctcggtccacgtcgccgagcggatggcgcggcggttgcgtgag
gagggattttcgcccacggtgacccaccgcgatttacagaccgcgccgcaggactcgctg
gagggggccccggtgaccatatcagggggcggagtttga

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