Sphingomonas psychrotolerans: CVN68_03975
Help
Entry
CVN68_03975 CDS
T05307
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphc03019
]
CVN68_03975
Messenger RNA biogenesis [BR:
sphc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CVN68_03975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_22
ZSWIM1-3_C
Rad17
AAA_16
AAA_29
T2SSE
ABC_tran
AAA_33
AAA_18
AAA_30
AAA_28
AAA_27
Herpes_Helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ATY31241
UniProt:
A0A2K8MJ64
LinkDB
All DBs
Position
complement(916361..917299)
Genome browser
AA seq
312 aa
AA seq
DB search
MSRRRPRQILLVTGMSGAGKSTALRTLEDLGWETVDNLPLLLLHRLLDTPPGEGADGDDD
RPLALGIGTQTRGFDAESIVQRVKKLSEQEGHEVGTLFLECAGAELERRYSETRRRHPLA
QDRPASDGIARERELLMPLRRWSNRLIDTTDLSSNELQQQIRSTFSGDGLGRTVLTITSF
GFARGLPRDADLVFDMRFLRNPHWVEALRPGTGQHVDVSTYIADDPAYGQAMAQIEALLL
LLLPRYQAEGKAYVTAAFGCTGGRHRSVHVAERMARRLREEGFSPTVTHRDLQTAPQDSL
EGAPVTISGGGV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgaaggcggccgagacagatcctgctcgtcaccggcatgtcgggggcgggcaaa
tcgaccgcgcttcggacgcttgaggatctcggctgggagaccgtcgacaatcttcccctg
ctcctgctccaccgactgctcgacacaccgcctggcgaaggcgccgatggcgacgacgac
cggccgctcgcgctcggcatcggcacccagacccgcggcttcgacgccgagagcatcgtc
caacgtgtcaagaaactcagcgagcaggaagggcacgaggtcggcacgctgttcctcgaa
tgcgcgggcgccgagctcgagcggcgctattcggagacgcggcggcgccacccgctggcg
caagatcgccctgccagcgacggcatcgcccgcgagcgcgaattgctgatgccactccga
cgctggtcgaaccggctgatcgacaccaccgacctctcctcgaacgagctgcagcagcag
atccgctcgaccttctcgggcgacggtctggggcgaacggtgctcaccatcacctccttc
ggttttgcgcgcgggctgccgcgcgacgccgacctcgtgttcgacatgcgtttcctgcgc
aatccgcattgggtggaggcgttgcgtcccgggacgggccagcacgtcgacgtctctacc
tatatcgccgacgatcccgcttatggacaggcgatggcgcagatcgaagcgttgctcctc
ctcctgctgccgcgataccaggccgaaggaaaggcatatgttaccgccgcattcgggtgt
actgggggccgccatcgctcggtccacgtcgccgagcggatggcgcggcggttgcgtgag
gagggattttcgcccacggtgacccaccgcgatttacagaccgcgccgcaggactcgctg
gagggggccccggtgaccatatcagggggcggagtttga
DBGET
integrated database retrieval system