Sphingomonas psychrotolerans: CVN68_05115
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Entry
CVN68_05115 CDS
T05307
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphc03009
]
CVN68_05115
Enzymes [BR:
sphc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CVN68_05115
Ribosome biogenesis [BR:
sphc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CVN68_05115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ATY31438
UniProt:
A0A2K8MC28
LinkDB
All DBs
Position
1135953..1137446
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AA seq
497 aa
AA seq
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MSPSKPPETQRIAKLLARAGIASRREIERMIAEGRIALDGVVLDTPATLLTSLDGVTVDG
DSVAAPAPARLFRYHKPAGLLTTEHDPAGRPIIYDRLPEGLPRVMPVGRLDLSTEGLLLL
TTDGELKRALELPATGVERSYRARAYGQISQPQLEELMLGVEIEGVRYGPINANIERRTG
ANVWIEMTLTEGKNREVRRVLEYLGLEVNRLIRTRYGPFWLGDLPPGDVDEVRQNDLITF
RTVLTNPGGGKAASNLQFAVRARVAEPAPKPQPVIEPDRRLRRAPAKAAPAPAEPNGPRF
TPRATPPAREERRPTGGAGRDAGSKTFGRSDRESRFKPGTKPAGRDERPTRADTPSREER
RPTGTAGRDAGGKAFGRSERPVRSEARPTGSDSRFKPGARAPARVERPVRDDARPPAKEA
RFTPRGTPPAHAGRPPREEARQVDKPARAARAKAHRDQQDPRAGEIVDRPRAGRPSKGPA
GGRGKPARPARPPRTRK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccatccaagccccccgaaacccagcgcatcgcgaagctgctggcccgtgccgga
atcgcgtcgcgccgcgagatcgaacggatgatcgccgaagggcgcatcgcgctcgacggt
gtcgtcctcgatacccccgcgacgttgctcacctcgctcgacggcgtcaccgtcgacggc
gattcggttgccgcgcccgccccggcgcggctgttccgctatcacaagcccgccggcctg
ctcaccaccgagcacgatcccgccggccgcccgatcatctacgatcggctgccggagggc
ctgccgcgcgtaatgccggtcggccggctcgacctgagcaccgaggggctgctgctcctc
accaccgacggcgagctcaaacgcgcgctcgagcttcccgccaccggcgtggagcgcagc
tatcgcgcccgcgcctacggccagatcagccagccccagctcgaggagctgatgctcggc
gtcgagatcgaaggcgtgcgctacggcccgatcaacgccaatatcgaacgccgcaccggt
gcgaacgtctggatcgaaatgacgttgaccgagggaaaaaaccgcgaggtccgccgcgtg
ctcgaatatctcggactcgaagtgaaccggctgatccgcacgcgttacggccccttctgg
ctcggcgacttgccccccggcgatgtcgacgaggtccgccagaacgatctgatcaccttc
cgcaccgtgctgacgaatcccggcggcggcaaggcggcgtcaaatctgcaattcgcagtg
cgcgcgcgcgtcgccgagccggcgcccaaaccgcaaccggtgatcgaacccgatcgccgc
ctccgccgagcgccggcaaaggccgcgcccgcgcctgccgagccgaacggcccgcgcttc
accccccgcgccacgcccccggcgcgcgaagagcggcgcccgacaggcggtgccggccgc
gacgcaggtagcaaaaccttcggccgcagcgatcgcgaatcccgtttcaagcccggcacg
aagccggcaggccgtgacgaacgtcccacgcgcgctgacacgccgtcgcgcgaggagcgc
cgtccgacgggcaccgcgggccgcgacgccggcggcaaagcctttggtcgcagcgagcgt
ccggtgcgcagcgaagcccgcccgaccggcagcgactcccgtttcaagcccggcgccagg
gcgccggcccgtgtcgaacgccccgtgcgcgacgacgcccgccccccggcgaaggaagcg
cgcttcacgccgcgtggcacgccgccggcccatgccgggcgtccgccgcgtgaggaggca
cgccaggtcgacaagcccgcgcgcgcagcgcgcgccaaggcgcatcgcgaccagcaggac
ccgcgcgccggcgaaatcgtcgatcggcctcgcgccggtcgcccaagcaaagggccggcc
ggcggtcgcgggaagcccgcccggcctgcgcgcccgccgcggacgcggaaataa
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