Sphingomonas psychrotolerans: CVN68_05680
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Entry
CVN68_05680 CDS
T05307
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc00550
Peptidoglycan biosynthesis
sphc01100
Metabolic pathways
sphc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVN68_05680 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CVN68_05680 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphc01011
]
CVN68_05680 (mrdA)
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CVN68_05680 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CVN68_05680 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ATY34443
UniProt:
A0A2K8MKP7
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All DBs
Position
1250399..1252378
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AA seq
659 aa
AA seq
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MGGGQAVVALVLAGRMTWLSVFENERYKMMAEDNRVSLTLSPPRRGWIVDRNGQPLANNR
TDFRVDLIPDRLERREETLAALRQMLGLTPEDMARIGTDLKRAQGFQPVQVKESLDWERY
AMVLVRLPELPGVQATQGFTRNYPLGAGVGHLIGYVGAASAEQYKETKDPLMVTPGFKMG
KDGLEKTLEARLRGEPGAKRVEVTARGKLVRELATRPDVPGKTVKLTIDAGLQEYCARRL
ADNSGSIVVLDCITGDVLAMVSMPGYDPNSFSDGISQSEWKMLSGDDHVPLMNKVLQGLY
PPGSTVKPMHALAVLRAGISPNATVNCTGALQVGRRAFHCHSRRGHGAVNMERAVAQSCD
IYFYSMARELGYDAFAPTVREMGLGQRFDLPYTSQRFGTVPDSAWKEKKYKQPWTIADSV
NASIGQGYVLANPLQLAVMAARMAQGRAIVPRLLLDGPHQPAPSLGIDPQHIQTVRQCMW
AVINGGGTAGKARLPIPGIELAGKTGTAQVRAITAAERRSGVLGNASLPFKLRDHTLFVC
FAPWDNPRYAASIVLEHHGHINPLTDVSPTARDIMTFLFDREKAMATLHELEKGWGGTYS
ERLARKSEAFKAAQAAAKAAPPPPVPEDAEAAASNVVSEAANATVPVGDVAGRDEDRAE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcggccaggccgtggtcgcgctggtgctcgcgggccggatgacgtggctctcg
gtgttcgagaacgagcgctacaagatgatggccgaggacaatcgggtgagcctgacgctc
agcccgccgcgccgcggctggatcgtcgaccgcaacggccaaccgctcgccaacaaccgc
accgatttccgcgtcgatctgatcccggatcgactggagaggcgcgaggagacgctcgcc
gcgcttcggcaaatgctgggcctcacgcccgaggacatggcgcgcatcggcaccgatctg
aagcgcgcgcaaggcttccagccggttcaggtcaaagagagcctcgactgggagcgctac
gccatggtgctcgttcggctgcccgagctgccgggcgtccaggcgacgcagggcttcacc
cgcaactatccgctcggtgccggggtcggccatctgatcggctatgtcggcgctgcgtcg
gccgagcagtataaggaaaccaaagacccgctgatggtcacgccgggcttcaagatgggc
aaggacgggctcgagaagacactcgaggcccggctccgtggcgagcccggtgccaagcgc
gtcgaggtcactgcgcgcggcaagctggtgcgtgagctcgcgacgcgtcccgacgtgcca
ggcaagaccgtcaagctcaccatcgacgcggggctgcaggaatattgcgcgcgccggctc
gccgacaattcgggctcgatcgtcgtgctcgattgcatcaccggcgacgtgctcgcgatg
gtctcgatgcccggctacgatcccaacagcttctccgacgggatcagccagagcgagtgg
aaaatgctctcgggcgacgatcacgtgccgctgatgaacaaggtgctgcaggggctctat
ccacccggttcgacggtcaagccgatgcatgcactggcggtgctgcgcgctggtatctca
ccgaatgcgacggtcaattgcaccggcgcgcttcaggtggggcgccgcgcctttcactgc
cacagccggcgcggccatggggcggtcaacatggaacgcgcggtggcgcagagctgcgac
atctatttctattcgatggcgcgcgagctcggttacgatgccttcgcgccgacggtgcgc
gagatgggcctcgggcagcgtttcgatttgccctataccagccagcgcttcggcaccgtc
cccgacagtgcgtggaaagagaagaagtacaagcagccctggaccatcgccgactcggtc
aatgcgtcgatcgggcagggctacgtcctcgccaatccgctccagctggcggtgatggcg
gcacggatggcgcagggccgcgcgatcgtgccacggctgctgctcgacgggccgcaccaa
ccggccccctcgctcggaatcgatccgcagcacatccagacggtgcgccagtgcatgtgg
gccgtgatcaacggcggaggtaccgcgggcaaggcgcgattgccgatccccggaatcgag
ctcgccggcaagaccggtaccgcacaggtccgcgcaatcaccgcagccgagcgccgctcg
ggcgtgctcggcaatgcgtcgctgccgttcaagctgcgcgaccatacgctgttcgtgtgc
ttcgcgccctgggacaatccgcgctatgccgcgtcgatcgtgctggagcaccatggtcat
atcaacccgctgaccgacgtgtcgcccaccgcgcgcgacatcatgaccttcctgttcgat
cgcgagaaggcgatggcgacgttgcacgaactcgagaaaggctggggcggcacctatagc
gagcggctggcgcggaagagcgaggcgttcaaggccgcgcaggcggcagcgaaggccgcc
ccgccgccgccggttcccgaggatgccgaagcggcggcgagcaatgtcgtttccgaggcc
gccaatgccaccgtgccggtcggcgacgtggccggacgcgatgaggatcgcgccgaatga
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