KEGG   Sphingomonas psychrotolerans: CVN68_09965
Entry
CVN68_09965       CDS       T05307                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sphc  Sphingomonas psychrotolerans
Pathway
sphc00010  Glycolysis / Gluconeogenesis
sphc00020  Citrate cycle (TCA cycle)
sphc00260  Glycine, serine and threonine metabolism
sphc00280  Valine, leucine and isoleucine degradation
sphc00310  Lysine degradation
sphc00380  Tryptophan metabolism
sphc00620  Pyruvate metabolism
sphc00630  Glyoxylate and dicarboxylate metabolism
sphc00640  Propanoate metabolism
sphc00670  One carbon pool by folate
sphc00785  Lipoic acid metabolism
sphc01100  Metabolic pathways
sphc01110  Biosynthesis of secondary metabolites
sphc01120  Microbial metabolism in diverse environments
sphc01200  Carbon metabolism
sphc01210  2-Oxocarboxylic acid metabolism
sphc01240  Biosynthesis of cofactors
Module
sphc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sphc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sphc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sphc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sphc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CVN68_09965 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CVN68_09965 (lpdA)
   00620 Pyruvate metabolism
    CVN68_09965 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CVN68_09965 (lpdA)
   00640 Propanoate metabolism
    CVN68_09965 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CVN68_09965 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CVN68_09965 (lpdA)
   00310 Lysine degradation
    CVN68_09965 (lpdA)
   00380 Tryptophan metabolism
    CVN68_09965 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CVN68_09965 (lpdA)
   00670 One carbon pool by folate
    CVN68_09965 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphc04147]
    CVN68_09965 (lpdA)
Enzymes [BR:sphc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CVN68_09965 (lpdA)
Exosome [BR:sphc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CVN68_09965 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 HI0933_like FAD_oxidored Lys_Orn_oxgnase GIDA AlaDh_PNT_C GMC_oxred_N Thi4 2-Hacid_dh_C 3HCDH_N UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: ATY32263
UniProt: A0A2K8MEH9
LinkDB
Position
2204423..2205823
AA seq 466 aa
MADQYDLIVLGSGPGGYVAAIRGAQLGLKVAIVERELLGGICLNWGCIPTKALLRSAEIY
HYMQHAKDYGLVAQGISADIEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHFGEGKLTGKG
KLSVTDKDGKKTDLEAKNIILATGARARDLPNLPTDGKRVWTYRHAMTPPEMPKKLLVIG
SGAIGIEFASFYNDMGAEVTVVEMLDRIVPVEDVDVSTFLEKALKKQGMTILTGAKIDKI
AADANGVKATIIAHDGKATESEFSHVIVAIGIVPNTENIGLKELGVAMDERGFLKTDPAC
KTNVDGLYAIGDITAPPWLAHKASHEGVIAAEAIAGNHPHAMDPRNIPGCTYCHPQIASV
GLTEAKAKEAGYAVKVGNFPFIGNGKAIALGEAEGFVKTVFDAKTGELLGAHMIGAEVTE
LIQGYTIGKTLETTEAELMETVFPHPTLSEMMHESVLGAYGRALHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtggctgaccaatacgacctcatcgtcctcggctcgggccccggcggctatgtcgccgcg
atccgcggcgcgcagcttggactcaaggtcgcgatcgtcgagcgcgaattgctgggcggc
atctgcctcaactggggctgcatccccaccaaggcactgctccgctcggccgagatctat
cattacatgcagcacgccaaggattacggcctcgtcgcgcaggggatcagcgcggatatc
gaggcagtggtcaagcgctcgcgcggggtggccaagcagctcaatcagggcgtcacgcac
ctgatgaagaagaacaagatcgcggtgcatttcggcgagggcaagctcaccggaaagggc
aagctcagcgtcaccgacaaggacggcaagaagaccgatctcgaggcgaagaacatcatc
ctcgccaccggcgcgcgcgcgcgggatctccccaatctgcccaccgacggcaagcgcgtc
tggacctatcgccacgcgatgaccccgcccgaaatgccgaagaagctcctcgtcatcggg
tcgggcgcgatcgggatcgagttcgccagcttctacaacgatatgggtgccgaggtgacc
gtggtcgaaatgctcgaccggattgtccccgtcgaggacgtcgatgtgtccaccttcctc
gaaaaggcactcaagaagcagggtatgacgatcctgaccggcgcgaagatcgacaagatc
gccgccgacgccaacggggtgaaggcgacgatcatcgcccacgacggcaaggcgaccgaa
agcgagttcagccatgtcatcgtcgcgatcggcatcgtgcccaacaccgagaatatcggg
ctcaaggagctcggcgtcgcgatggacgagcgcggcttcctcaagaccgatcccgcctgc
aagaccaatgtggacgggctctatgcgatcggcgacatcaccgcgccgccctggctcgcg
cacaaggcaagccacgaaggcgtgatcgccgccgaggcgatcgccggcaaccacccgcac
gcgatggacccgcgcaacatcccgggctgcacctattgccacccgcagatcgccagcgtc
ggcctgaccgaggccaaggcgaaggaagcgggttacgcggtgaaggtcggcaacttcccc
ttcatcggcaacggcaaggcgatcgcgctcggcgaggccgaaggcttcgtgaagacggtg
ttcgacgcgaagaccggcgagctgctcggcgcgcacatgatcggcgcggaggtcaccgaa
ctgatccagggctacacgatcggcaagacgctcgagaccaccgaggccgagctgatggag
acggtgttcccgcacccgacgctgagcgagatgatgcacgagagcgtgctcggcgcctat
gggcgtgcgctgcacatctga

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