Sphingomonas psychrotolerans: CVN68_10845
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Entry
CVN68_10845 CDS
T05307
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc00040
Pentose and glucuronate interconversions
sphc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CVN68_10845
Enzymes [BR:
sphc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
CVN68_10845
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
ATY32409
UniProt:
A0A2K8MKY2
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All DBs
Position
complement(2396596..2397900)
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AA seq
434 aa
AA seq
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MRPGRAICQGLAAMALALAGTAAADPAAEWVDTLTGHRVIRISREAGTASLYFHQNSYTP
EGDKMVVSVPGGISVVDLKTWEVTPLVRQNGAILLFTGRKTRTAYYQRRGPDGGSWAIFA
VDIDSGKVRKIAEVDRGFIGSINADETLLLGQWAENDKPLQPGAKPADNSRFGQAQYAAN
WPDGRPMTYAEAKEVRLNERLEAKIPMEIFTIDVKTGARKLVTASTDWLNHVQFSPSDPQ
QILYCHEGPWHKVDRIWTIRADGSDKRLVHNRTMNMEIAGHEFFSPDGKTIWYDLQTPRG
EVFWLAGYDLASGKRRWYNVERNEWSVHFNQAPGRAQFSGDGGDSEMVAHAPDGKYLYLF
TPRDIPDVAGIHAPGAENLIAPGTLDAEKLVDMRKHDYRLEPNMTFTPDGKWIVFRANFE
GANHVYAVEVAKRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgggacgtgcgatttgccaaggcctcgcggcaatggcgctggcgctggcggga
accgcggcggccgatccggcggcggagtgggtggacacgctcaccgggcacagggtgatc
cggatcagccgagaggcgggcacggcgagcctctattttcaccagaacagctatacgcct
gagggcgacaagatggtggtctcggtgcccggcgggatctcggtggtcgatctcaagacg
tgggaagtgacgcctctggtcaggcagaacggcgccatcctgctgttcaccggccgcaag
acccgcacggcttattatcaaagacgcgggccggacggcgggtcttgggcgatcttcgcg
gtggatatcgacagcggcaaggtgcgcaagatcgcggaggtggatcgcggcttcatcgga
tcgatcaacgccgacgagaccctgctgctcggccaatgggcggagaacgacaagccgctc
cagccgggcgcgaagcctgccgacaacagccgcttcggccaggcgcaatacgccgccaac
tggcccgacggccgcccgatgacctatgccgaggccaaggaagtgcggctcaacgagcgg
ctcgaggccaagatcccgatggagatcttcacgatcgacgtgaagaccggcgcgcgcaag
ctcgtcaccgcctcgaccgactggctcaaccatgtacagttctcgccgagcgatccgcag
cagatattgtattgccacgaggggccgtggcacaaggtcgaccggatctggacgatccgc
gccgacgggagcgacaaacgcctcgtccacaatcgcacgatgaacatggagatcgccggc
cacgagttcttctcgcccgacggcaagacgatctggtacgatctccagaccccgcgcggc
gaagtgttctggctcgccggctacgacctcgcgagcggaaagcgccgctggtacaatgtc
gagcgcaatgaatggtcggtgcatttcaatcaggcaccggggcgcgcgcaattctcgggc
gacggcggcgacagcgagatggtcgcgcacgcgccggacggcaaatatctttatctgttc
acgcccagggacattcccgacgtcgccggcatccatgcgcctggcgcggagaacctgatc
gcgccggggacgctcgatgccgaaaagctcgtcgacatgcgcaagcacgattaccggctc
gagcccaacatgaccttcacccccgacggcaaatggatcgttttccgcgccaatttcgaa
ggcgccaaccatgtctatgcagtcgaggtggcgaagcggagatag
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