Sphingomonas psychrotolerans: CVN68_11720
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Entry
CVN68_11720 CDS
T05307
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sphc
Sphingomonas psychrotolerans
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
EAR
Motif
Other DBs
NCBI-ProteinID:
ATY32560
UniProt:
A0A2K8MF91
LinkDB
All DBs
Position
complement(2588329..2592834)
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AA seq
1501 aa
AA seq
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MTVDGAGSALTFAKDLVLGFSGGAGILTIQNGGNVANQNGTLGSQPGSVGTAHVAGAGST
WTHAGNLVVGHHAAGTLVVSSGGMVASTSGIVGRFDDSIGMITVTGAGSAWTNSADLTVG
GDGPGTLTIANGGSVSAGGMVTLAANVGSSGDLNIGGSVGAAATGAGALGAANVHFGAGA
GRINFNHTGANFAFSAAMSGAGTLNHLAGATHLTGDSSGYTGPTHVLGGTLLVDGKLGGG
AVDVQTGGTLSGIGMIGGTVTIASGGTLSGLQGQMLTVQNLDLAGGVNVDVTLSTPGGAA
LFHITNDLTLDGTLNITSGGIFGPGIYSLMTYGGALTDNGLDVGTTPSGTTTNDFAVQTA
VAGQVNLISTALPNLGFWDGDAAGSADNNAIDGGSGVWSATSTNWTDFNGTINGVMHPQP
GFVIFQGLAGTVTADASAGVIAVTGMQFASDGYQINGAPITLADANSIIRVGDGSAAGAN
FTATIGSVLTGTGGLNKTDLGTLILTADNDYAGGTTITGGTLQLGNGGTSGSVTGDIVDN
GTLIFNRSDLTTFAGAISGAGTIRQSGTGTTNLTGNSGAFTGMITVNGGGLGIMSGGALN
AGSFYAALDAGSTGAVAVDGVGSSLTSTGPLVIGAGGAGTLTVGNGATVSDNQAFVGYLA
GSSGTATVDGAGSIWATTNDLTIGSAGSGTLNIANGGSVTSASGNLGAAAGAQGTVTVSG
AGSSWINSGEIGIGGSGTGVLTIGNGGKVRSDFGSLGVNVGAIGTAAVNGAGSIWTNTDD
LIVGARGTGTLTIANGGAASNIDGVLGHDPGASGSVTVDGVGSTWTNSGNVFVGGSGVGT
LNIVNGGAVSGVIGNLGFGAGSIGTATVDGVGSTWTNTGNLNVGADGSGTLTIANDGAVS
AGEAFVVAGNAGSTGVLNIGAAAGSPAAGAGALNAANLQFGNGSGVVNFNHNATNYLFAT
NMAGAGTINQLAGNTNLTGSSNGFVGAVNVKGGRLAVNGSLAGGQVTVSNGATLGGNGVI
GSLTAQSGSIIAPGNSIGTLNVAGNASFASGSTYQVELTSTGLSDLINVAGATSIANGAR
LSVVKTDAAPYVLGTHYTVLKAAGGVTGSYTFDNLQLTNFIGLVAGADASSVYLDVAKTK
TFGSAGATPNETATGQGLDSLPLTSVLVGAVANLPTDAAAQGAFNQLSGEIHASMASGMV
EDGRIVRESMLDRLRGSIDSLPATADGRVSVWGRGFGSRGRLGGDGNAASIKHDDSGFLM
GVDGMVGSDWRIGFVGGYSHSTVQDAARASSGKSDNYHVGVYGGAQLGKLGLRSGLAYTL
HDVTTTRAVAFAGISDALRGEYQARTTQAFGEIAYALPMGKASLEPFANLAYVDHGAGGF
AEKGGAAALSGKGGQANVTFSTAGLRGVSQFELGGGALVKARGAIGWRHAFGDVAPEATM
AFMGGSSFDIGGAPIVREGAVIDLGADVELSDKTNLGLSYGGQFGSGSSSNSLRATLAVK
F
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgacggcgccgggtcggccctcacctttgccaaagaccttgtcttgggcttt
agtggcggcgcgggcatcttgacgattcagaatggcggcaacgtcgccaatcagaacggc
acgctgggctcccagcccggctcggtgggcacggcgcacgtcgccggggcggggtcgacc
tggacccatgccggaaacctcgttgtcggccaccacgccgctggaacgcttgtcgtgtcg
agtggcggcatggtggcaagtacctctggcattgtcggccggttcgacgattctattggt
atgataaccgtcaccggcgcgggctcggcatggaccaacagtgccgatctcactgtcggc
ggcgacggccccggcacgctgacaatcgccaatggcggatcggtgtcggcgggtggcatg
gtcaccctggcggccaatgtcggctcgagcggtgatctgaatatcggtggttcggtcggc
gcggccgccaccggcgccggcgcgctcggcgcggcgaacgttcacttcggcgcgggcgcg
gggcgcatcaacttcaaccacacgggcgccaacttcgctttctccgccgcgatgagcggt
gcgggcacgctcaatcacctggccggcgcaacccacctcacgggcgactcgagcggctat
acgggtcccacccacgttctcggcggcacgctgctggtggacggcaagctcgggggcggt
gcggtcgacgttcagactggcggcacattaagcggcatcggcatgatcggcgggacggtg
accatcgcctcgggcggcacgctcagtgggctgcagggccagatgctcaccgtgcagaat
ctcgatctcgcgggcggcgtaaacgtcgatgtgacgttgagcactcccggcggcgctgcg
ctgttccacatcaccaacgacctgacgctggacggcacgctgaacatcacttccggcggc
atcttcggcccgggcatctacagcttgatgacctatggcggcgccctgaccgataacggt
ctggacgtcggaaccacgcccagcggtacgacgacgaacgacttcgccgtgcaaactgcg
gtcgccggacaggtaaacctgatcagcaccgccttgccaaatctaggtttctgggacggc
gacgcggcaggttcggccgacaacaacgctatcgatggcgggtcgggcgtctggagcgcg
acctcgacgaactggaccgatttcaacggcacgatcaacggggtgatgcacccccaaccc
ggtttcgtcatcttccagggcctcgcgggaacggtgacggccgatgccagcgccggcgtg
atcgcggtcacgggaatgcagttcgccagcgacggctatcagatcaacggtgcgccgatc
acgttggccgatgccaattccatcatccgggtcggtgacggttcggcggcgggcgccaat
ttcacggcgaccatcggttcggtgctgaccggcacgggtggtctgaacaagaccgacctg
ggtacgctgatcctgactgccgacaatgactatgccggcggcacgacgatcaccgggggc
acgctgcaactgggcaatggcgggacgagcggctcggtcacgggcgacatcgtcgataac
ggcacgctgatcttcaaccgttccgacctgacgaccttcgcgggtgcgatctccggcgcc
ggcacgatcaggcagagcggtacgggcacgaccaacctgaccggcaattcgggcgcgttc
acgggcatgatcaccgtcaacggcggcggcctcggcatcatgagcggcggcgcgctgaat
gccggcagcttctatgcggcgctcgacgcgggttcgaccggcgcggtggctgtggatggc
gtgggttcgtcactgaccagcaccgggccgctggtcatcggcgcgggtggcgcgggaacc
ctgaccgtgggcaatggcgctacggtgagcgataaccaggcgttcgttggctacctcgcc
ggctccagtgggacagcgacggtcgatggtgcgggttcgatctgggcgaccaccaacgac
ctgaccattggctcggcgggttccggcacgctgaacatcgccaatggcggttcggtcacc
agcgcttctggcaatctgggcgccgccgcgggcgcgcagggcacggtgaccgtcagcggc
gccggctcgagctggatcaacagcggggagatcggcatcggtggaagcggcacgggtgtg
ctgacgatcgggaatggcggcaaggtccgcagcgacttcggtagtttgggtgtaaacgtc
ggtgcaatcgggacggcggccgttaacggcgcgggttcgatctggaccaacaccgacgat
ctcatcgtgggtgcgcgcgggaccggcacgctgacgatcgcgaatggcggtgctgccagc
aacatcgatggcgttctgggccatgacccaggcgcgagcggctcggtgacagtcgatggt
gtcggctcgacctggaccaacagcggcaatgtttttgtcggcggcagcggcgtcggcacg
ctgaacatcgtcaacggcggcgcggtcagcggggtgatcggcaatctgggtttcggtgcg
ggatcgatcggcaccgcaacggtggatggcgtgggctcgacctggaccaacaccggcaat
ttgaatgtcggcgccgacggctcgggcacattgacgatcgccaatgacggtgcggtgtcg
gcgggtgaggcgttcgtcgtggccggcaatgcgggctcgaccggcgttctcaacatcggc
gccgcagcgggttcgcctgcagccggggctggcgccctgaacgccgcaaatctgcagttc
ggcaacggcagcggcgtagtcaacttcaaccacaatgctaccaactacctgttcgcgacg
aacatggcgggcgccggcacgatcaaccagctcgccggcaacaccaacctgacgggcagc
tcgaacgggttcgttggcgcggtcaacgtcaagggcggccgcctggcggtgaacggttcg
ctggcaggtggccaggtgaccgtcagcaacggcgccacgctcggtggaaacggcgtcatc
ggcagcctcacggcgcagtccggatcgatcattgcgccgggcaactcgatcggcacgctg
aacgtcgccggcaatgccagcttcgccagcggctcgacctatcaggtcgagctcacctcc
accggcctcagcgatctgatcaacgtggcaggtgccacgagcattgcgaacggtgcgcgt
ctgagcgtcgtcaagaccgatgccgcaccctacgtcctcggcacccactataccgtgctg
aaggcggctggcggcgtgaccggcagctacacgttcgacaatctccagctgaccaacttc
atcggcctggtcgccggcgcagatgccagcagcgtgtatctcgatgtcgccaagaccaag
accttcgggtccgccggcgcaacgccgaacgagacggcgacgggccaggggctggacagc
ctgccgctgacctcggtcctggtcggcgcggtcgcgaacctgccgaccgatgctgccgca
cagggcgcgttcaatcagctttcgggcgaaatccatgcctcgatggcgagcgggatggtc
gaggacggcaggatcgtgcgggaatcgatgctcgaccgcctgcgcggctcgatcgactcg
ctgccggcgacggccgatggccgcgtctcggtctggggccgtggcttcggatcgaggggc
cgcttggggggtgacggcaacgccgcatccatcaagcacgacgatagcggcttcctgatg
ggcgtcgacggcatggtcggcagcgactggcggatcggttttgtcggtggctacagccat
tcgacggtccaggatgcggctcgcgcatcctcgggcaagagcgacaattaccatgtcggt
gtctatggcggcgcgcaactgggcaagctcggccttcggtcgggcctcgcctacacgctg
cacgacgtaacgacgacgcgggccgtcgccttcgccggcatctcggatgcgctgcgtggc
gagtatcaggcgcggaccacccaagcgtttggcgagatcgcctatgcccttcctatgggc
aaggcctctctcgagcctttcgccaaccttgcctatgtcgaccacggggcgggcggcttt
gctgaaaagggcggcgcggcggcgctttccggcaagggagggcaggcgaatgtcaccttc
tcgaccgccggcttgcggggcgtatcgcaattcgagctgggcggtggcgccctggtcaag
gcgcgcggtgcgatcggatggcggcacgctttcggggacgtcgcgcccgaggcgacaatg
gccttcatgggcggttcttcctttgacatcggcggtgcgccgatcgtcagggagggggcg
gtaatcgatctcggtgccgatgtggagctcagcgacaaaaccaatttgggcctctcttat
ggggggcagttcggatcgggttcctccagcaactccctgcgcgccacgctcgccgtgaag
ttctga
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