Sphingomonas psychrotolerans: CVN68_12160
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Entry
CVN68_12160 CDS
T05307
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc00550
Peptidoglycan biosynthesis
sphc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVN68_12160 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sphc01002
]
CVN68_12160 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphc01011
]
CVN68_12160 (dacB)
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CVN68_12160 (dacB)
Peptidases and inhibitors [BR:
sphc01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CVN68_12160 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sphc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CVN68_12160 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ATY32633
UniProt:
A0A2K8MFI4
LinkDB
All DBs
Position
complement(2699698..2701128)
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AA seq
476 aa
AA seq
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MKHLLLPLLLVASPAFAQQSLQQQVEARFAEAATGTRFGLVVLDEDGKEIVAVNPDGRFI
PASNTKMFTTAAAYASLAGLDQPDASGGAAVRIEGGDVILEGHGDARLSSAGDCQVDCLA
TLADAVAAKTKQVRHVIGDDTLFPDQRWSPGMSWNNIPSRYGTGISALTLDDNELVIQVM
PGTLGAAARIALPLGYFTIDNRALTVAGAERKLGYDRDVNSRVLRLTGTIGVDAKPEPLR
VGIDDPAHYAAWRFRGLLAARGVKVTGAVSARHRALVLTDDPEVRKNAPATRPPVQPTLA
RLTPPPLAEDVVRINKESQNLHAELLMRRVGLRRGAGSIADGVAEVRAMLEAAGVPRTAW
DLSDGSGMSSYNRVAPRGAVKMLRWIAAQPWGAAWRASLPIGGVDGTLSKRFKGTLLEGK
LFAKTGTLNATNALSGYLIAKSGKTLTFSTFANDVPADASATRFLDAALVLVAEAN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacctgctgcttccgctcctcctcgtcgccagccccgcatttgcgcagcagagc
ctgcagcagcaggtcgaggcgcggttcgccgaggcggcgaccggaacccgcttcgggctg
gtcgtgctcgacgaggacggcaaggagatcgtcgcggtcaatcccgacgggcgcttcatc
ccggcgtcgaacaccaagatgttcactaccgccgccgcctatgcgtcgctcgccgggctc
gatcagcccgatgcctcggggggcgccgcggtgcggatcgagggcggcgacgtgatcctc
gaaggccatggcgatgcgcggctgtccagcgccggcgattgtcaggtcgactgcctcgcc
acgctggccgacgcggtggccgcgaagacgaaacaggtgcggcacgtgatcggcgacgat
acgctgttccccgaccagcgctggagcccggggatgagctggaacaatatccccagccgc
tacggcaccggcatctcggcgttgacgctcgacgacaatgagctggtgatccaagtgatg
ccgggcacgctcggcgcggcggccaggatcgcgctgccgcttggctatttcacgatcgac
aatcgggcgctcacggtggccggtgcggagcgcaagctcggctatgaccgcgacgtcaac
agccgcgtgctgcggctgaccggcacgatcggtgtggatgcgaaacccgaaccgcttcgc
gtcggcatcgacgatccggcgcattatgcggcatggcggttccgcggcctgctcgcggcg
cgcggggtcaaggtgacgggtgcggtctcggcgcgacaccgcgcgctcgtgctgaccgac
gatcccgaagtgcgcaagaatgcgcctgcgacgcgtccgccggtgcagcccacgctggcc
cggctgactccgccgccgctcgccgaggatgtggtgcggatcaacaaggagagccagaac
ctccacgccgaattgctgatgcggcgcgtgggcctccgccggggagccggctcaatcgcc
gatggcgtcgccgaggtgcgcgcaatgctcgaggcggcgggcgtgccgcgcaccgcctgg
gatctgtccgacggttcggggatgtcgagctacaaccgggtggcgccgcgcggggcggtc
aagatgctgcgctggatcgccgcccagccctggggcgcggcgtggcgggcgtcgctgccg
atcggcggagtcgacgggacgctgtcgaagcgcttcaaagggacgctgctggaagggaag
ctgttcgccaagacggggacgctcaacgccaccaatgcgctgtcgggctatctgatcgcg
aaaagcgggaagacgctgaccttctcgaccttcgccaacgacgtgccggccgatgcgagc
gcgacgaggttcctcgatgctgcgctggtgctggtggcggaggctaactag
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