Sphingomonas psychrotolerans: CVN68_12870
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Entry
CVN68_12870 CDS
T05307
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVN68_12870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_12870
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CVN68_12870
DNA repair and recombination proteins [BR:
sphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CVN68_12870
Prokaryotic type
CVN68_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATY32758
UniProt:
A0A2K8MFV1
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All DBs
Position
complement(2873391..2874089)
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AA seq
232 aa
AA seq
DB search
MGEIKLHPGWLEPLKDEFADPYMTALREFLVTEKAAGKRVFPAGGEWFRALDLTPLEQVR
VVILGQDPYHGEGQAHGLCFSVRPGVRTPPSLVNIYKEMEADLGIPRARHGFLEHWAQQG
VLLLNAVLTVQMSMAASHQGRGWERFTDAVIRLVNAKQEPVVFLLWGSHAQKKAAFVDSI
DKGGRHLVLKAPHPSPLSAHSGFFGCRHFSKANAFLTSRGHQPIDWALPELD
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaataaaactgcatccgggctggctcgaaccgctgaaggacgagttcgccgac
ccgtatatgaccgcgctacgggaattcctcgtcacggagaaagcagcgggcaagcgcgtc
tttcccgccggcggcgagtggttccgggcgctcgatctgacgccgctcgagcaggtccgc
gtcgtgatcctcggccaggatccctatcatggcgaagggcaggcgcatggcctgtgcttc
tcggtgcgtcccggcgtgcggacgcccccgagcctcgtcaacatctacaaggaaatggag
gccgatctcggcatcccgcgagcgcgccacggctttctcgaacattgggcgcaacagggc
gtgctgctgctcaacgccgtgctcaccgtccagatgagcatggccgcctcgcatcagggg
cgcggctgggagcggttcaccgacgcggtgatccggctggtcaacgccaagcaggagccg
gtggtgttcttgctgtgggggagccacgcgcagaaaaaggcggcgttcgtcgattcgatc
gacaaaggcgggcggcatctcgtcctcaaggcgccgcacccttcgcccttgtcggcgcac
tccggatttttcggctgccggcacttttcgaaggccaacgcatttctgaccagtcggggg
caccagccgatcgactgggcactccccgagctggattga
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