KEGG   Sphingomonas psychrotolerans: CVN68_13420
Entry
CVN68_13420       CDS       T05307                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sphc  Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:sphc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphc03400]
    CVN68_13420
Enzymes [BR:sphc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CVN68_13420
    5.6.2.6  RNA 3'-5' helicase
     CVN68_13420
DNA repair and recombination proteins [BR:sphc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CVN68_13420
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ATY34613
UniProt: A0A2K8ML72
LinkDB
Position
complement(2984447..2986834)
AA seq 795 aa
MTDWFAGRGWRPRRHQLDMLAAARAGQHSLLVAATGAGKTLAGFLPTLVELIERPTQGLH
TLYISPLKALAVDVQRNLLTPIDEMGVPIRVETRTGDTPHERKVRQRARPPEILLTTPES
LSLLLSYEDSLTMFAGLKTVVIDEVHAFATGKRGDLLALAMARLQRLAPEMRRVALSATV
ADPDGYRAWLAPDGDIDEVTLVQGEKGADPNIAILLPEGRVPWAGHSGVYAIPQVMAEIE
THRTTIVFCNTRGLAELVFQQLWKANELKLPIGVHHGSLSLEARRKAEQAMADGKLRALV
ATASLDLGVDWGDVDCVIQMGAPKGSSRLLQRIGRANHRLDESSEAVLVPGNRFEYLEAR
AALDAVEQGELDPDVFRPGALDVLAQHIMACACAAPFDAAQMLQEVRAALPYSALEQETF
DRVLSFIADGGYSLRAYDKFKRLTKGQDGLWRVTRPSFIAQHRLNAGIIVEAPMLDVRFK
NGRRLGKVEEAFGSQLSPGDTFFFAGLSLEVERVELTDLIVRASAKQARYVSYMGARLAI
TATLANRVRVFLHDRGQWQRFPADVREWLEVQERRSTIPAPAQVLVETFPHEGKHHMVAY
SFEGWNAHQSLGMLITRRMEAMGLKPLGFVANDYALAVYGLEKITDPAALFSPDILEHEF
VDWVQQSALLKRAFREVAIIGGLVERQHPGKKKSGRQVTFSTDLIYDVLRKYEPDHLLLK
AAWADARARMTDVGRLAHLLDTAADTMLHMDLERVSPMAVPVLIMIGRERTPQGSGEDAL
LIEAEGIAAEAMRLD
NT seq 2388 nt   +upstreamnt  +downstreamnt
ctgaccgactggttcgccggccgcggctggcggccgcggcggcaccagctcgacatgctt
gccgcggcgcgcgcggggcagcattcgctgctcgtcgcggcgaccggggcgggcaagacg
ctggccggtttcctgccgacactggtggagctgatcgagcggccgacgcaggggctgcac
acgctctacatctcgccgctgaaggcgttggcggtcgacgtacagcgcaatctgctcacg
ccgatcgacgagatgggtgtcccgatccgcgtcgaaacgcggaccggcgacacgccgcat
gaacggaaagtgcgccagcgggcgcggccacccgagattttgctcactacgcccgaatcg
ttgagcctgttgctgtcctacgaagacagtttgacgatgttcgcagggctgaagaccgtc
gtgatcgacgaagttcacgccttcgccaccggcaagcgcggcgatctgctcgcgctggcg
atggcgcggctgcagcggctcgcgccggaaatgcgtcgggtcgcgctgtcggcgaccgtc
gcggaccccgacggctatcgcgcgtggctggcacccgatggcgacatcgacgaggtgact
ctggtgcagggcgagaagggtgccgatccgaacatcgcgatcctgctccccgaaggccgg
gtgccgtgggcggggcattcgggggtgtatgcgatcccgcaggtgatggcggagatcgaa
acccatcgcacgacgatagtcttctgcaacacccgcggcctcgccgaactggtcttccag
cagctgtggaaggccaacgaactcaagctgccgatcggcgtgcatcatggcagcctcagc
ctcgaagcgcggcgcaaggccgagcaggcgatggccgacggcaaattgcgcgcattggtc
gcgaccgccagcctcgatctcggagtcgattggggcgatgtcgattgcgtgatccagatg
ggggcgcccaagggctcgtcgcgattgctccagcggatcgggcgcgccaatcaccggctc
gacgaatcgagcgaggcagtgctcgtccccggcaatcgcttcgaatatctggaggcgcgc
gcggcgctcgacgcagtcgagcaaggcgagctcgatcccgacgtcttccgccccggcgca
ctcgacgtgctggcgcagcacatcatggcgtgcgcctgcgcggcgccgttcgatgctgcg
caaatgctgcaggaagtgcgtgcagcattgccttattcggcgctcgagcaggagacgttc
gatcgcgtcctcagcttcatcgccgatggcggctattcgctgcgtgcctatgacaagttc
aagcggctgaccaaggggcaggacgggctgtggcgcgtcaccagaccctctttcatcgcg
cagcaccggctcaatgccgggatcatcgtcgaggcgccgatgctcgacgtgcggttcaag
aacggccgccgcctcggcaaggtcgaggaggcgttcgggtcgcagctttcgccgggcgac
acctttttcttcgcggggctgagcctcgaggtcgagcgagtcgagctgaccgacctgatc
gtgcgggcgagcgcgaagcaggcgcggtatgtgtcgtatatgggcgcgcggctggcgatc
accgcgaccttggccaatcgcgtccgcgtcttcctccacgatcgcggccagtggcagcgt
ttcccggcggatgtgcgcgaatggctcgaagtgcaggagcgccgctcgacgatcccggcg
ccggcgcaggtgctggtcgagaccttcccgcacgagggcaagcaccacatggtcgcctac
agcttcgagggttggaacgcacaccagtcgctcggcatgctgatcacccggcggatggag
gcgatggggctcaagcccctcggcttcgtcgccaatgattatgcactggcggtctacggg
ctcgaaaagatcaccgatccggctgcgctgttttcgcccgacattctcgagcacgagttc
gtcgattgggtgcagcaatcggcgctgctcaaacgcgccttccgcgaagtcgcgatcatc
ggcgggctggtcgagcgccagcatcccggcaagaagaagagcggccgccaggtcactttc
tcgaccgacctgatctacgacgtgctgcgcaaatacgagcccgatcatctgctgctcaag
gccgcctgggccgatgcgcgcgcgcggatgaccgatgtcgggcggctcgcgcatctgctc
gacaccgccgccgacacgatgctgcacatggatctggagcgggtgagcccgatggcggtg
ccggtgctgatcatgatcggccgcgagcgcacgccgcagggcagcggcgaggacgcattg
ctgatcgaggccgagggcattgcggcggaggcgatgcggctcgactga

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