Sphingomonas psychrotolerans: CVN68_13545
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Entry
CVN68_13545 CDS
T05307
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc00730
Thiamine metabolism
sphc01100
Metabolic pathways
sphc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CVN68_13545
Enzymes [BR:
sphc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CVN68_13545
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATY32868
UniProt:
A0A2K8MG61
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All DBs
Position
3005080..3006975
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AA seq
631 aa
AA seq
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MADLPARTEIGVTTGPIRGSKKIHVGPLGVKMREIHLDPSSGEAPVRVYDTSGPYTDPDA
RIDIKAGLPALRRDWILGRGDVEQIEARQVRPEDNGQLGPDRSGGVEPFPNVIKRPLRAK
PGANVSQMYYARRGIITPEMEYVAVRENLGRERLAEYARDGESFGASIPDYVTPEFVRDE
VARGRAIIPNNINHPESEPMAIGRNFLVKINANIGNSAVASNVAAEVDKMVWSIRWGADT
VMDLSTGRNIHDTREWILRNSPVPIGTVPIYQALEKVGGVAEDLTWEIFRDTLIEQAEQG
VDYFTIHAGVRLGYIPMAAKRVTGIVSRGGSIMAKWCLAHHKESFLYERFDEITEIMKAY
DIAYSLGDGLRPGSIADANDEAQFSELYTLGELTHRAWKQDVQVMIEGPGHVPMHKIKEN
MDKQLEVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAQVRDNALSKARFEFRWRDQFNLSLDPDTAEEYH
DQTLPAEGAKTAHFCSMCGPKFCSMQISQEVRDFAKKQNQGVEGFLATGPTGAETAAASK
AAALKGMEEMSRVFKESGSELYMGARGREHD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctccccgcacgcaccgaaatcggcgtaaccaccggcccgatccgcggctcg
aagaagatccatgtcggcccgctcggcgtcaagatgcgcgagatccatctcgatcccagc
tcgggcgaggccccggtccgcgtctacgacacctcgggcccgtacaccgatccggacgcc
cgcatcgacatcaaggccggccttcccgcgctccgccgcgactggatcctcggccgcggc
gatgtcgagcagatcgaagcccggcaagtccgccccgaggataatggccagctcggcccc
gaccgcagcggcggcgtcgagcccttccccaacgtgatcaagcgccccttgcgcgccaag
cccggcgccaatgtcagccagatgtattacgcccgccgcggcatcatcacccccgagatg
gaatatgtcgcggtccgcgagaatctcggccgcgagcgcctcgccgaatatgcacgcgac
ggcgagagcttcggcgcttccatccccgattacgtcacccccgaattcgtccgcgacgaa
gtggcgcgcggccgcgcgatcatccccaacaacatcaaccaccccgagtccgagccgatg
gcgatcggccgcaatttcctcgtcaagatcaacgccaatatcggcaacagcgcggtcgcc
tcgaacgtcgccgccgaagtcgacaagatggtctggtcgatccgctggggcgcggacacg
gtgatggacctctccaccgggcgcaacatccacgacacccgcgaatggattctccgcaac
tcccccgtcccgatcggcactgtcccgatctatcaggcgctcgaaaaggtcggcggtgtc
gccgaggacctcacctgggagatcttccgcgacactttgatcgagcaggccgagcagggc
gtcgactatttcaccatccatgccggcgtgcggctcggctacatcccgatggcggcgaag
cgcgtcaccggcatcgtctcgcgcggcggcagcatcatggcgaaatggtgcctcgcgcac
cacaaggagagcttcctctacgagcgcttcgacgagatcaccgagatcatgaaggcctat
gacatcgcctattcgctcggcgatggcctgcgccccggcagcatcgccgacgccaatgac
gaagcccagttcagcgagctctacaccttgggcgagctcacccaccgcgcgtggaagcag
gacgtccaggtgatgatcgaaggccccggccatgtgccgatgcacaagatcaaggagaat
atggacaagcagctcgaggtctgcggcgaggcgcccttctacacgctcgggccgctcacc
accgatatcgcgccgggctacgaccacatcaccagcggcatcggcgccgcgatgatcggc
tggtacggcactgcgatgctctgttacgtcacccccaaggagcatctcggcctccccgac
cgcgacgacgtcaaggtcggcgtggtgacctacaagctcgccgcccacgccgccgatctc
gccaagggccaccccgccgcgcaggtccgcgacaatgctttgtcaaaggcgcgcttcgag
ttccgctggcgcgaccagttcaacctgtcgctcgatcccgacaccgccgaggaatatcac
gaccagacgctccccgccgaaggggccaagaccgcgcatttctgctcgatgtgtgggccg
aaattttgctcgatgcagatttcgcaggaagtgcgcgacttcgccaagaagcagaaccag
ggcgtcgaaggcttcctcgccaccgggccgacgggcgcggagactgcagcggcgagcaag
gccgcggcgctcaaggggatggaagagatgagccgggtgttcaaggagagcgggagcgag
ctgtatatgggagctcggggtagggagcacgattga
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