Sphingomonas psychrotolerans: CVN68_15200
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Entry
CVN68_15200 CDS
T05307
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphc03016
]
CVN68_15200 (truB)
Enzymes [BR:
sphc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CVN68_15200 (truB)
Transfer RNA biogenesis [BR:
sphc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CVN68_15200 (truB)
Prokaryotic type
CVN68_15200 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ATY33145
UniProt:
A0A2K8MGY3
LinkDB
All DBs
Position
complement(3357081..3357965)
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AA seq
294 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRDGGYGKFKVGHGGTLDPLATGVLPIAIGEATKL
AGRMLDSDKVYAFTIRFGMQTDTLDLEGKEIAVSDVRPTLAQVERILLRFTGPIEQVPPA
YSALKVDGERAYDLARAGEEVVLTKRAVTVYSLVRHPGDGVEEVTLTAHVSKGTYIRSLA
RDIALALGTVGHVTMLRRTRAGPFSLDSAISLDILTDAAKARTLEQLLLPLRAGLDDIPA
LSLTPDQAGLLRRGQVLEGTAADDGQYFATLDDVPVALVEAQAGFVRVVRGFNL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggctggatcatcctcgacaagcccctggggctcggctcgacgcagggcgtcagc
gcagtcaagcgggcgctgcgcgacggcggctatggcaagttcaaggtcggccatggcggc
acgctagatccgctggcgaccggcgtgctgccgatcgcgatcggcgaggcgaccaagctc
gccgggcggatgctcgacagcgacaaggtttatgcgttcacgatacgcttcggcatgcag
accgacacgctcgacctggagggcaaggagatcgcagtgtccgatgttcggccgaccttg
gcgcaagtcgaaagaatactgctgcgcttcaccggcccgatcgagcaggtcccgccggcc
tattcggcgctcaaggtggatggcgagcgcgcctatgacctcgcccgggcgggcgaggaa
gtggtgctgaccaagcgcgcggtgacggtctactcacttgttcgtcatccgggcgacggt
gtggaagaggtcaccctcaccgcccatgtctcaaagggtacctatatccgcagcctcgcc
cgcgacatcgcgctcgcgctaggcaccgttggccatgtcaccatgctccgccgcaccagg
gccggcccgttcagcctcgattctgcaatttcgctggacattttgaccgatgccgctaag
gcccgcacccttgaacagttactcctgccgttgagggcggggctggacgacatcccggct
ctatctctcactcccgaccaggcagggctgctccgcagggggcaggttctggaagggacc
gccgccgatgatggccaatacttcgcgacactggacgatgtgccggtcgcgctggtggag
gcacaggccggattcgtccgggtcgtccgcggcttcaatctgtaa
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