Sphingomonas psychrotolerans: CVN68_16270
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Entry
CVN68_16270 CDS
T05307
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc00061
Fatty acid biosynthesis
sphc00071
Fatty acid degradation
sphc01100
Metabolic pathways
sphc01212
Fatty acid metabolism
sphc02024
Quorum sensing
sphc04146
Peroxisome
Module
sphc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CVN68_16270
00071 Fatty acid degradation
CVN68_16270
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CVN68_16270
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVN68_16270
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sphc01004
]
CVN68_16270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sphc04147
]
CVN68_16270
Enzymes [BR:
sphc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CVN68_16270
Lipid biosynthesis proteins [BR:
sphc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CVN68_16270
Exosome [BR:
sphc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CVN68_16270
Exosomal proteins of breast cancer cells
CVN68_16270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ATY33326
UniProt:
A0A2K8ML76
LinkDB
All DBs
Position
complement(3564158..3565834)
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AA seq
558 aa
AA seq
DB search
MTDPEHVWRTAFHHPGQWDTRFPPATMVDLFEASAAAHPQAPLLDFMGRKYSYGETRNGV
HRVACGLRALGYGPGDRIGLFLPNVPHYVAAYYGILKLGATVVNFSPLYSVEELAAQVAD
SGTKLLFTLSASALLPTALKVLEQSALERLVVGSVAGALPPAKSLFYRWFKAKEVAERPD
DPRILAFSQLIANEGGCEPVALDPERDVALIQYTGGTTGTPKGAVLTHQNLSANARQVAQ
LDPDFGKTRDSILGVLPFFHVFANTCVLNRTVLTGGEIVMLPRFNAKQALAELRRTRPRS
LPGVPTMYQALLDAPGMKAADFSSLRYCISGGAPLSAQLKEEWERVTGARVIEGYGLSES
SGVVSTNPYEGLNKPGTIGQPLAATRVRLVDKEDPTRPPPPGEPGEIVVSGPQIMKGYWN
RPDADAEVFVDDHWLRTGDVGTIDEDGYIRIVDRLKDMIAVGGFKVFPSQIEAVLYRHPA
IKEALVIGLPDAYHGELPHAYVVLNEEADPISGPELSLWLNAQLGKHERVSQVVIRESLP
KTMIGKLSRKDLIAEVSA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccgagcacgtctggcgcactgcgtttcatcatcccggccaatgggatacg
cgtttcccccccgccacgatggtcgaccttttcgaagcgagcgccgccgcgcatccgcag
gcgcccttgctcgatttcatgggccgcaaatacagctatggcgagacccgcaatggcgtt
caccgcgtcgcctgcggactgagagcgctcggctacggccccggcgaccggatcgggctc
tttctgcccaatgtcccgcattatgtcgcggcctattacggcatcctcaagcttggtgcg
acagtcgtcaatttctcaccgctttactcggtcgaggagctggcggcgcaggtcgcggat
tcgggcacgaagctgctcttcacgctttccgcttcggcgctgctgcccactgcgctgaaa
gtgctcgagcagagcgcactcgagcgtctcgtcgtcggctcggtggcgggggcattgccc
ccggccaagtcgctcttctatcgctggttcaaggcaaaggaagtcgccgagcgccccgat
gatccgcgcattctcgctttctcgcagctgatcgcgaacgagggcggctgtgagcctgtg
gcgctcgatcccgaacgcgacgtcgcgctgatccaatataccggcggcaccaccggtacg
cccaagggcgcggtgctgacccatcagaatctttcggccaatgcccggcaggtcgcccag
ctcgatcccgatttcggcaagacccgggattcgatcctcggcgtcctccccttcttccac
gtcttcgccaacacctgcgtgctcaaccgcaccgtgctgaccggcggcgagatcgtcatg
ctgccgcgcttcaacgccaagcaggcgctcgccgaactccgccgcacccggccgcgctcg
ctccccggcgtcccgaccatgtaccaggcgctgctcgacgcgcccggcatgaaggctgcc
gacttcagctcgctgcgctactgcatctcgggcggcgcgccgctctccgcccagctcaag
gaggaatgggagcgtgtcaccggcgcgcgcgtgatcgagggctatggcctgtccgaaagc
tcgggcgtggtctcgaccaatccctatgaggggctcaacaagcctggcacgatcggccag
ccgctcgccgccacccgcgtccggctcgtcgacaaggaagatcccacccgaccgccgccc
ccgggcgagcccggcgagatcgtcgtttcgggcccacagatcatgaaaggctattggaac
cgccccgacgccgacgccgaggtgttcgtcgatgatcattggctgcgcaccggcgatgtc
ggcaccatcgacgaggatggctatatccgcatcgtcgaccggctgaaggacatgatcgca
gtcggcggcttcaaggttttccccagccagatcgaggcggtgctgtatcgccacccggcg
atcaaggaagcgctcgtgatcggcctgcccgacgcctatcacggcgagctgccccacgcg
tatgtcgtgctgaacgaggaagccgatccgatctcgggtcccgaactctccctttggctc
aacgcccagctcggcaagcacgagcgcgtcagccaggtggtgatccgcgaaagcctgccc
aagacgatgatcggcaagctcagccgcaaggacctgatcgccgaggtttccgcctga
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