Sphingomonas psychrotolerans: CVN68_19210
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Entry
CVN68_19210 CDS
T05307
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphc03032
]
CVN68_19210 (gyrB)
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_19210 (gyrB)
Enzymes [BR:
sphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CVN68_19210 (gyrB)
DNA replication proteins [BR:
sphc03032
]
Prokaryotic type
DNA Topoisomerases
CVN68_19210 (gyrB)
DNA repair and recombination proteins [BR:
sphc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CVN68_19210 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
GH18_BT1044-like
Motif
Other DBs
NCBI-ProteinID:
ATY34756
UniProt:
A0A2K8MPQ0
LinkDB
All DBs
Position
complement(4210194..4212725)
Genome browser
AA seq
843 aa
AA seq
DB search
MLGMASNDDQTPENLPNANAYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVS
DNAIDEALAGHCDKIVIQLNPDGSVSVEDNGRGIPTGIHTEEGVSAAEVIMTQLHAGGKF
ENTSDTNAYKVSGGLHGVGVSVVNALSEWLDLNIWRDGEEHYMRFAFGDAVAPLKVLGPA
PEGKKGTRVTFLASPATFKITEYDFEKLEHRYRELAFLNSGVRLFLRDARHEEVKEVELY
YEGGIAAFVKYLDRNKVPLMPEPVAIAGTRDDVTVDVALEWNDSYYENVLCFTNNIPQRD
GGTHLAAFRAALTRTLNNYADKSGALKKEKVTLTGDDMREGLTAIVSVKLPDPKFSSQTK
DKLVSSEVRQPLESLMADKMAEWLEENPAMARAIIQKVIDAAAAREAAKKARELTRRKGV
MDIASLPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRDRHFQAILPLRGKILNVERAR
FDRMLASREIGTLIQAMGTGIGRDDFNVEKLRYHKIVIMTDADVDGAHIRTLLLTFFYRQ
MPEIIEKGHLYIAQPPLYKATKGRSEVYLKDDSALDQYLVDAGVGGNVLEAPGGARSGDD
LRDLVEHARRMRTLMRYVPRRYDPMIIEALALGNGLDPNASREQREGSLTSVVTRLDAAD
ADARWSARVTDDGGYHFERRWRGVTDHHIVEAAFLVSAEARKLHALAIEQSASYLLPSKL
VPSKAIPATEIEAAATLEGEEAEEPVTVAKGQTLVSRPSQLLDAILAAGRKGLSIQRYKG
LGEMNAEQLWETTLDPTNRSMLVVQVDQADVADAIFTQLMGDVVEPRREFIQENALSVAN
LDV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcatggcatccaacgacgatcagacccccgaaaatctccccaacgcgaacgcc
tatggcgcagactcgatcaaggtcctcaagggcctcgacgcagtccgcaagcggcccggc
atgtatatcggcgataccgacgacggctcgggcctccaccacatggtgttcgaggtctcg
gacaatgcgatcgacgaggccctcgccgggcattgcgacaagatcgtcatccagctgaac
ccggacggatcggtctcggtcgaggataacggccgtggcatccccaccggcatccacacc
gaggaaggcgtgtcggcggccgaagtcatcatgacccagctccatgccggcggcaagttc
gagaacacctcggacaccaatgcctacaaggtctcgggcggtctccacggcgtcggcgtc
tcggtggtcaacgcgctctccgagtggctcgatctcaacatctggcgcgacggcgaagag
cattacatgcgcttcgcgttcggcgatgcggtcgccccgctcaaggtcctcgggccagcg
cccgaaggcaaaaagggcacgcgcgtcacgttcctcgcctcgccagccacgttcaagatc
accgaatacgacttcgagaagctcgagcaccgctatcgcgagctggccttcctcaattcg
ggcgtgcggctgttcctgcgcgacgcgcggcacgaggaagtcaaggaagtcgagctctat
tacgagggcgggatcgccgcgttcgtgaagtatctcgatcgcaacaaggtgccgttgatg
cccgagccggtggcgatcgcgggcacccgcgacgacgtcaccgtggacgtcgcgctcgag
tggaacgattcttattacgaaaacgtcctctgcttcaccaacaacatcccccagcgcgac
ggcggcacccatctcgcggcgttccgcgccgcgctgactcgcacgctcaacaattatgcc
gacaaatcgggcgcgctgaagaaggagaaggtcaccctcaccggcgacgacatgcgcgag
gggctgactgcgatcgtctcggtcaagctgcccgatcccaagttcagcagccagaccaag
gacaagctcgtctcgtcggaggtgcgccagccgctcgaatcgctgatggccgacaagatg
gccgagtggctcgaggaaaacccggcaatggcccgcgcgatcatccagaaggtgatcgac
gccgccgccgcgcgcgaggccgccaagaaggcgcgcgagctcacccggcgcaagggcgtg
atggacatcgcctcgcttcccggcaagctcgccgactgccaggagcgcgatcccgccaag
tccgaactgttcctcgtcgagggtgactcggccggcggctcggccaagcagggccgcgac
cgccatttccaggcgatccttcccttgcgcggcaagatcctcaacgtcgaacgcgcgcgc
ttcgatcggatgctggccagccgcgagatcggcacgttgatccaggcgatgggcaccggc
atcggccgcgacgacttcaacgtcgagaagctgcgctaccacaagatcgtcatcatgacc
gacgccgacgtcgacggcgcgcatatccgcaccttgctgctgaccttcttctatcgccag
atgcccgagatcatcgagaaggggcacctctatatcgctcagccgccgctctataaggcg
accaagggccggtcggaggtctatctcaaggacgatagcgcgctcgaccagtatctggtc
gacgccggtgtcggcggcaacgtgctcgaggctccgggcggcgcgcgcagcggcgacgat
ctgcgcgatctggtcgagcatgctcgccgcatgcgcacgctgatgcgctacgtgccgcgg
cgctacgatccgatgatcatcgaggcgctggcgctcggcaacgggctcgatcccaatgcg
agccgcgaacagcgcgaggggagcctgacatcggtggtgacccggctcgacgcggcggat
gccgatgcgcgctggtcggcgcgagtgaccgacgatggcggctatcatttcgagcggcgc
tggcgcggcgtgaccgatcaccacatcgtcgaggcggcgttcctcgtctcggccgaggcg
cgcaagctccacgcgctggcgatcgagcagtcggcgagctatctgctgccctccaagctg
gtgccgtccaaggcgatccccgccaccgagatcgaggccgcggccacgctcgaaggcgag
gaagccgaggagccggtgaccgtggccaagggccagaccctggtttcgcggccgagccaa
ttgctcgacgcgatcctcgccgcggggcgcaaggggctgtcgatccagcgctacaagggt
ctcggcgaaatgaacgccgagcagctctgggagaccacgctcgatccgaccaaccgctcg
atgctggtggtccaggtcgaccaggccgatgttgccgacgcgatcttcacccagctgatg
ggcgacgtcgtcgagccgcgccgcgagttcatccaggagaatgcgctgagcgtcgccaat
ctcgacgtctga
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