Sphingomonas psychrotolerans: CVN68_19760
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Entry
CVN68_19760 CDS
T05307
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphc03016
]
CVN68_19760
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CVN68_19760
Transfer RNA biogenesis [BR:
sphc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CVN68_19760
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ATY33914
UniProt:
A0A2K8MLN9
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All DBs
Position
complement(4339522..4340058)
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AA seq
178 aa
AA seq
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MHRLFVGLRPPPAIRAQLLALMGGVSAARWQDDSQLHLTLRFIGEVERPIAEDVAVALAN
VHFPPVEVALDGVGQFDSRGRPSALWAGIRPHDAVTGLHKKVDQALVRCGLAPERRAYLP
HITLARMNASAGTTERFLVSHAGLASPLFGLDHFLLFESTLGREGAVYEAIERYPLRG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcctgttcgtcggcctccgcccgccccctgcgatccgcgcgcagctcctcgcc
ctcatgggcggcgtctccgccgcgcgctggcaggacgattcccagctccatctcacgctg
cgcttcatcggcgaagtcgagcgcccgatcgccgaggacgtcgccgtcgcgctcgccaac
gtgcattttccgccggtcgaagtggcgctcgatggcgtcggccaattcgacagccgcggc
cggcccagcgcgctctgggccggaatccgcccgcacgacgcagtcaccgggcttcacaag
aaggtcgatcaggcgctggtccgctgcggcctcgcgcccgagcgccgcgcctatctgccg
cacatcaccctcgcccggatgaacgcctccgccggcaccaccgaacggttcctcgtgagc
cacgccggcctcgccagcccgcttttcggcctcgatcatttcctgctgttcgaaagcact
ctcggccgcgaaggcgccgtctatgaagcgatcgagcgctatccgctgcggggatga
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