Sphingomonas psychrotolerans: CVN68_19940
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Entry
CVN68_19940 CDS
T05307
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
sphc
Sphingomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphc02000
]
CVN68_19940
Transporters [BR:
sphc02000
]
Other transporters
Pores ion channels [TC:
1
]
CVN68_19940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
Motif
Other DBs
NCBI-ProteinID:
ATY33944
UniProt:
A0A2K8MLR7
LinkDB
All DBs
Position
complement(4369704..4373057)
Genome browser
AA seq
1117 aa
AA seq
DB search
MKQRWARDGVPGAIVACPPQMGIFDMRNTMLLAASAPFAIAAASMLPSAAQAQNVICKNT
ANADAGTIAAGKDRDVACGNNASITGDGSVAIGADTTAATRSTAVGWQASADDDSTAIGR
ASTAAGTNAIAIGNGASTSGQYTAAIGTSSQAFGFTSVAVGAFSKANVSTATAVGSSSEV
LASGGVALGSYSVADRANTVSVGTAASQRQIVNVAAGTQSSDAVNKGQLDAATADERLSA
FAGNINGDRGVSAIATGLESIAIGGDSNATGGGLALGRRATTIGNFGTAIGQDSQSTANN
AIALGASSLADRVNTLSIGSVGSERQIVNVAAGTAATDAVNKAQLDAVAASAGAVKSGTG
ANSVQTASSTATGIGAVALGQGQTATGNGAVAIGDPNTATGNGAVAIGADNIANGDGAVA
LGLTSNAQGTAAIALGLEAKARTTGSIAAGLRADAQGDEAVAIGADTIAGEFGTALGRGA
RATGGSANATGGLSLASGSFSTASGTQSQATQAYSTATGALAVATGDRTTATGGRSTASG
DRSASYGYDSAATQTFSTAIGTAAQATASGATSLGYSANAATRDSIAIGNGASATAAANG
GGIAVGGGATTTGGGLAIGGTTSAATTATGAFSTAVGNGATATGGVAVGRNTTAAGGSAF
GNNATANSQAAAVGDGAQATAFLSTAVGQGTVASNLSATALGGQSRATGASATAVGASSV
ASGDASVTLGLFSGASATRSTALGANAQAMAMRSTALGSGTVADETDTVSVGISAAAAAT
FNTTAATKRIVNVADGINANDAVTKGQLDAAVFTAGGNAALAQATANTALANGAYFRANS
TGALPQATGAEAIAVGGGSLASGAQSVAIGSAARAVGGKAVSIGAGNTASGDGAVAIGDP
NVATGTGAIALGANNSATGTGAVALGNASSATGDGSVAIGNGAVASRAGQVALGTSASTY
TAAGIASSASRVAQAGALSLISTDALGNLATSTLDVTRLAGLDGRATALENRATLLEGRT
GALESRTSVLENQSRVLGRQARAANGGIAAAMALGGTVMPPDMTVAVSFNLATYRSEQGF
SGAVVARVTDHIWVSGGFAGSTVKGSTGGRAGMTFGW
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcggtgggcacgggacggcgtgcctggcgcaatcgtcgcgtgtccaccgcaa
atggggatattcgacatgcgtaatactatgctgctcgctgcttcggcgccgtttgcgatc
gccgccgcgtccatgctgccttcggcggctcaagctcagaatgtgatctgcaagaacacg
gcgaacgccgacgccggaaccatcgcggccggcaaggaccgcgatgtggcgtgcggtaac
aatgcgtcgataaccggcgacggcagcgtagccatcggcgcggatacgaccgctgcaacg
cgttcgactgcggtgggatggcaggccagtgccgacgatgactccacggcaatcggtcgg
gcaagcactgccgcgggcaccaatgcgatagccatcggcaatggtgccagcacgtctggg
caatacacggctgctatcggcacatcctctcaggcgttcggcttcacctcagtcgcggtt
ggcgcattctccaaggcgaatgtttcaaccgcgacggcggtcggcagttcgtccgaagtg
ctggcgagcggtggcgtcgcgttgggatcatactccgttgccgaccgtgccaacaccgta
tccgtgggcactgccgcatcgcagcgtcagatcgtcaacgtcgctgccggcacgcaaagt
tccgatgctgtgaacaagggccagctcgatgctgcgacagcggatgagcgcctgtccgcc
tttgccgggaacatcaacggcgatcggggggtatcggcaatcgctaccgggctggaatcg
attgcgatcggtggcgacagcaatgccacgggcggagggctagcgctcgggcggcgtgcc
acgacgatcgggaatttcggcaccgcgatcggccaggactcacagtcgacggcgaacaac
gccattgccctgggggcgtcgtcgctcgccgaccgtgtcaacaccttgtcgatcggtagc
gtgggttcggagcgtcagatcgtcaacgtcgcggccggtaccgccgcgaccgatgcggtg
aacaaggcgcagctcgacgcggtcgccgcttcggcgggtgcggtcaaatcgggcactggc
gccaacagcgtgcagaccgccagcagcaccgccacgggcattggcgccgtagccttggga
caggggcagactgcgacaggaaacggagccgtggcgatcggcgatccgaacacagcgacc
ggcaacggtgctgtcgcgatcggcgcggataatatcgccaacggcgatggcgccgtcgcg
ctggggctgacctccaacgcgcaggggacggcagccatcgcgctgggcctggaagcgaag
gcccggacgactggatcgatcgcggccggattgcgcgcggatgcgcagggtgacgaagcg
gtcgctatcggcgccgatacgatcgcaggcgagttcggcaccgcgcttggccgcggcgcc
cgggcgaccggcggcagtgccaacgcgaccggcggcctgtcgctcgcgtcggggagtttc
tccaccgccagcggcacgcaatcgcaggcaacgcaggcttactcgacggccacgggcgcg
ctggctgtggcgacgggggatcgcacgaccgctacgggcggacgatcgacggcgagcggc
gacaggagtgcgtcatacggttatgattcggcggcgacgcagacgttttcgaccgcaatc
ggcacggcggcacaggccaccgcgtctggcgcgaccagcctgggctattccgccaacgca
gccactcgcgattcgattgcgatcggcaacggagcatccgctacggcggccgcaaatggt
ggcggcatcgccgtaggcggcggggctacaacaacgggcggcggcctggcgattggtggc
acgaccagtgctgccacgaccgcaaccggggcgttctcgactgcagtcggtaatggcgcg
acggcaaccggcggcgtggcggtcggtcgcaacacgacagccgccggcggcagcgccttc
ggcaacaacgcaacagccaatagtcaggcggcagcggtcggcgatggtgcacaagccacc
gctttcctttcaacggcggtcggtcagggaacggttgcaagcaacttgagcgccactgcg
ctgggtggccaatcgcgcgcgactggcgcgtcggccaccgccgttggcgcaagcagcgtc
gcaagcggcgacgcatcggtaacgctgggcctgttcagcggggccagcgcgacacgcagc
acggcacttggcgccaatgcccaggcaatggcaatgcgatcgactgcacttggaagtggt
accgtcgccgacgagaccgatacagtgtcggtgggtatttcggcggctgcggccgcgacg
ttcaacacgaccgcagcgaccaaacggatcgtcaacgttgccgatggcatcaatgcgaac
gatgcagtgaccaaggggcagctggatgcggccgtgttcaccgccggcggcaatgcagcg
cttgcgcaagccaccgccaatacagcgctggccaacggcgcttacttccgcgccaatagc
accggcgcgttgccgcaggcgacgggtgccgaagcgattgcggtcggcggcggcagcctt
gccagcggtgcacaatcggttgcgatcggttcggccgcgcgtgcggtgggcggcaaggcc
gtgtcgatcggcgcgggaaatactgcgtcgggtgatggcgccgttgcgatcggcgatccc
aatgtcgcgaccggaaccggtgccattgcactgggtgcgaacaacagcgcgaccggcacg
ggagccgtcgcgctcggtaacgcgagcagcgcaaccggggacggatcggttgcgatcggc
aatggcgcggtggcaagccgcgcggggcaagtcgcgctggggacgtcggcgtcgacctac
acggccgctggtatcgcctcgtcggcgagccgggtcgcccaggccggggcgctctcgctg
atcagtacggatgcgttgggcaatctggccacctcgacgctcgatgtgactcgactcgcc
ggcctcgacgggcgtgccacagcactcgagaatcgcgcgacgttgctggagggcagaacc
ggtgctctggagagccgcaccagcgtgctcgagaaccagagccgggtgctcgggcgacag
gcccgtgccgccaatggtggtatcgctgcagccatggcgctcggcggcaccgtgatgcca
ccggacatgacggtggcggtatcgttcaacctggccacctatcgcagcgagcagggcttc
tcgggtgccgtcgtcgccagggtgaccgatcacatttgggtgagcggcggatttgcgggc
tccaccgtcaagggctcaaccggcggccgcgccggcatgaccttcggctggtaa
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