Sphingomonas psychrotolerans: CVN68_20235
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Entry
CVN68_20235 CDS
T05307
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CVN68_20235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphc02000
]
CVN68_20235
02044 Secretion system [BR:
sphc02044
]
CVN68_20235
Transporters [BR:
sphc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CVN68_20235
Secretion system [BR:
sphc02044
]
Type I secretion system
Multiple protein transporter
CVN68_20235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_16
AAA_21
AAA_22
AAA_33
ABC_membrane
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_25
Cytidylate_kin
nSTAND1
AAA
NACHT
NB-ARC
AAA_5
AAA_18
nSTAND3
APS_kinase
AAA_23
MMR_HSR1
TsaE
AAA_14
Mg_chelatase
AAA_28
AAA_24
UT
PRK
Motif
Other DBs
NCBI-ProteinID:
ATY33992
UniProt:
A0A2K8MJC5
LinkDB
All DBs
Position
4470213..4471919
Genome browser
AA seq
568 aa
AA seq
DB search
MRAALALCRRHFVSAAFFSALINLLYIVPTLYMLQVYDRVVPTQGVQTLAFLTMVLLFAL
ATLSLLDRIRTRLLVRAGVQLDATLAPLILDATLGRPDLPIARQALREFDTMRGTLTGQG
VLALFDAPWVPIYILVCFLVHPWIGMVAILGCAILPLIAWANERATRSRLDRAQLIAGTS
YANQDALLASSDSIRALGMRRAMVARQLRQREAMLAAQTEASFAAGSYLTATKFTRLALQ
SLALGLGALLAVDNLISGGAIFAASFLIARALAPIEQLIGTWKTIVQAQQSYQNLNTLLE
GTIAQPEPTRLPPPQGAIVLEGVTVLNEARDGAILNAVSLRIEPGEVVAIVGPSGAGKST
LARTIAGALPPDRGTIRLDGADTRDWDPEQLARHIGYLPQDSALFAGSVAENIARFAGEL
GEDRATVDAAVVAAAGKVGADPLIRRLPNGYDHQLKLGGRGVSAGQAQRIALARAIYGDP
RILILDEPNAHLDSEGDAALVAALAALKAEGHTILVVSHKLGILPVVDKMLVLRDGRAEI
YGPRDEVMAKIAPPNLRQVAPPAAKANG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcggcgctggctttgtgtcggcgacacttcgtctcggccgcgtttttcagtgcg
ttgatcaatctgctctacatcgtcccgaccttgtacatgctgcaggtctatgatcgcgtc
gtgccgacgcagggtgtgcagacgctggccttcctgacgatggtgctgctcttcgcactg
gcgactttgtcgctgctcgatcgcatccgcacccggctgctggtgcgcgccggggtccag
ctcgacgccacgctcgcgccgctgatcctcgacgcgaccctgggccggcccgatctcccc
atcgcgcggcaggcgctccgcgagttcgatacgatgcgcggcacgctgaccgggcagggg
gtcctggcgttgttcgatgcgccgtgggtgccgatctatattctggtctgcttcctcgtc
catccttggatcgggatggtggcgattctgggctgcgcgatcctgccgctgatcgcctgg
gccaacgagcgcgcgacgcgcagccggctcgaccgcgcccagctgatcgccggcacttcc
tatgcgaaccaggatgccttgctcgcgtcgagcgacagcattcgcgcgctcggcatgcgc
cgcgcgatggtcgcgcgccaattgcgccagcgcgaggcgatgctcgccgcgcagaccgag
gcgagcttcgcggcgggcagctatctcaccgccaccaaattcacccggctggcgctgcaa
tcgctcgcactcgggctcggcgcgctgctggcggtcgacaatctgatctcgggcggggcg
atcttcgccgcttcgttcctgatcgcgcgcgcgctggcgccgatcgagcaattgatcggc
acctggaagacgatcgtccaggcgcaacagagctatcagaacctcaatacattgctcgaa
ggcaccatcgcccagcccgaaccgacacgcctgccgccgccgcagggcgcaatcgtgctc
gaaggcgtgactgtgctcaacgaggcgcgcgacggggcgatcctcaacgccgtgtcgctg
cgcatcgagcccggcgaagtcgtcgcgatcgtcggccccagcggcgcgggcaagtctacg
ctggcgcgcacgatcgccggcgcgctgccgcctgatcgcggcacgatccggctcgacggc
gccgacacgcgcgattgggatccggagcagctcgcccgccatatcggctatctgccgcag
gattcggcgctgtttgccggttcggtcgccgagaatatcgcgcgcttcgccggcgagctc
ggcgaggacagggcgaccgtcgatgcggcggtggtcgctgccgcaggcaaggtcggcgcc
gatccgctgatccgccggctgccgaacggctatgaccatcagctcaagctcggcggccgc
ggcgtctcggccgggcaggcgcagcgcatcgcgctcgcgcgcgccatctatggcgacccg
cgcatcctgatcctcgacgagcccaatgcccatctcgacagcgaaggcgatgctgcgctg
gtcgcggcgctggcggcgctcaaggccgaggggcacacgatcctggtcgtctcgcacaag
ctcggcatcctgccggtggtcgacaagatgctggtattgcgcgacggccgagccgagatt
tacggcccgcgcgacgaggtcatggccaagatcgccccgcccaatctgcggcaagtggcg
ccgcctgcggcaaaggcgaacggatga
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