Sphingomonas psychrotolerans: CVN68_22880
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Entry
CVN68_22880 CDS
T05307
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphc
Sphingomonas psychrotolerans
Pathway
sphc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CVN68_22880 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphc03400
]
CVN68_22880 (xth)
Enzymes [BR:
sphc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CVN68_22880 (xth)
DNA repair and recombination proteins [BR:
sphc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CVN68_22880 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ATY34953
UniProt:
A0A2K8MM67
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All DBs
Position
unnamed:complement(152965..153765)
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AA seq
266 aa
AA seq
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MKIATCNVNGVNGRLPVLVRWLEEEQPDIAVLQELKAPQEKFPEKTIRDLGYDVVWHGQK
SWNGVAMLSRVGEIHETRRGLPGDPDPAQSRYIEAAVNGLLIAGLYLPNGNPRPGPKFDY
KLLWFERLIEHAADLLASGAPVVLAGDFNVMPTELDVYKPERWLDDALFAPEVRAAFFRL
LEQGWTDALRTMHPDETIYTFWDYFRNAYGRNAGLRIDHLLLSPSLADRLVDAQVDRQVR
GWEKTSDHAPTWIELADAKPARRKQK
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctgcaatgtgaacggagtgaacggtcgcctgcccgtcctggtgcgg
tggttggaggaagagcagccagacatcgcggttttgcaggagttgaaagccccgcaggag
aaattcccggaaaaaacgatccgggatctcggttacgatgtcgtctggcacggccagaag
agctggaacggcgtcgcgatgctgagccgcgtcggcgagatccatgaaacccggcgcggc
ttgccgggcgatcccgatcccgcacaaagccgctatatcgaagcggcggtgaacggcctg
ctcatcgccggcctctatctgcccaatggcaatccccgcccgggacccaagtttgactac
aagcttctctggttcgagcggctcatcgagcatgccgctgatcttctagcgagcggcgcg
ccggtcgtgctggctggtgactttaacgtcatgccgaccgagctggacgtctacaagccg
gaacggtggctggacgacgcgttgttcgcgccggaggttcgcgcggccttctttcggctc
ctcgagcaaggttggaccgacgccttgcggaccatgcatcctgacgaaacgatctacacc
ttttgggactatttccggaacgcatacggccgcaacgcgggcttgcgcatagatcacctc
ctgctcagtccttctctcgctgaccgcttggtcgatgcgcaggtggaccggcaggtgcgc
ggttgggaaaagaccagcgaccatgcacccacatggatcgagcttgccgatgccaaaccg
gcccggaggaagcaaaaatga
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