Rhizorhabdus wittichii DC-6: HY78_00135
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Entry
HY78_00135 CDS
T05200
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HY78_00135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sphd01007
]
HY78_00135
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphd03016
]
HY78_00135
Enzymes [BR:
sphd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
HY78_00135
Amino acid related enzymes [BR:
sphd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HY78_00135
Transfer RNA biogenesis [BR:
sphd03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HY78_00135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ARR51977
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All DBs
Position
complement(25305..27338)
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AA seq
677 aa
AA seq
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MADFLLELLSEEIPARMQEKASADLARLFTEELAKAGLAPDGITSYVTPRRLALIAHGLP
VETAAVSEELKGPKVSAPPQALEGFLRKTGLAREQLVERDGTLFAVIEKPGRATAAVLAE
AIPAIVRSFPWPKSMRWGTASLSTAALRWVRPLQGIVALLGEDIVPFEIDGVTSGAATVG
HRFHHPGIITIGSAADYAGKLRACHVIVDHAERRDIIRARAAELAAGQGMTVIPDEGLVA
ENAGLTEWPVPLLGHFDPAFLEVPREVIQLTLRTNQKYFVLNDAEGKLAPAFICTANISA
RDGGAAIVAGNGKVLAARLSDAKFFWEQDLKVPLDDYLPKLEAMLFYEGMGTLREKADRI
AALAAWIAQAYFPERDPETARRAGLLAKADLATAMVGEFPELQGVMGGYYAEKRGEKPGT
VSALKQQYVAAVEGCIPACVALADRIDTLVAFFARGIKPTGSKDPFALRRAALQTIQTIL
VNGTRMNLLATIEQAKTGLGASGLDSAELLDFFADRLKVQQREAGVRHDLIDAVFALGGE
DDLVRLLARVKALQAFVETEDGANLLAGYKRAANILRKEGGVPEGASATPDYQPEVAESA
LIAALDAAEPKAAAAVEAEDFAGAMAALATLRGPIDAFFDQVIVNDSSSSKRNTRLALLE
KIRVAVHNVADFSNIEG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatttcctgctcgaactcctctccgaggaaatccccgcgcggatgcaggagaag
gcatcggccgacctcgcccgcctgttcaccgaggaactggccaaggccgggctcgcgcct
gacggcatcacctcctacgtcaccccgcgccgcctcgcgctgatcgcgcacggcctgccg
gtcgagacggcggcggtgtcggaggagctgaaggggcccaaggtctcggcgccgccgcag
gcgctcgaaggcttcctgcgcaagaccggcctcgcccgcgagcagctcgtcgagcgcgac
ggcacgttgttcgcggtgatcgagaagccgggccgtgcgaccgccgcggtgctggccgag
gcgatccccgcgatcgtccgcagcttcccctggcccaagtcgatgcgctggggcaccgcc
tcgctgtcgaccgccgccttgcgctgggtccgcccgctccagggcatcgtcgccctgctc
ggcgaggatatcgtgccgttcgagatcgacggcgtgaccagcggcgcggcgacggtcggc
caccgcttccaccatccgggcatcatcacgatcggcagcgccgccgactatgccgggaag
ctgcgcgcctgccacgtcatcgtcgaccatgccgagcgccgcgacatcatccgcgcccgc
gccgccgagctggcggcggggcagggcatgacggtcatccccgacgaggggctggtcgcc
gagaatgccggcctcaccgaatggccggtgccgctgctcggccatttcgacccggccttc
ctggaggtgccgcgcgaggtgatccagctcaccctgcgcaccaaccagaaatatttcgtg
ctcaacgacgccgagggcaagctcgccccggccttcatctgcaccgccaacatcagcgcc
agggacggcggcgcggcgatcgtcgcgggcaacggcaaggtgctggcggcgcggctgtcg
gacgcgaaattcttctgggaacaggacctcaaggttccgctcgacgattatctccccaag
ctggaggcgatgctcttctacgagggcatgggcacgctgcgcgagaaggccgatcgcatc
gcggcgctcgcggcctggatcgcgcaagcctatttccccgagcgcgatccggagacggcg
cgccgcgcgggcctgctcgccaaggccgatctcgccaccgcgatggtcggcgagttcccc
gagctgcagggcgtgatgggcggctattatgccgagaaacgcggcgagaagccgggcacc
gtctccgcgctcaagcagcaatatgtcgcggcggtcgagggttgcatccccgcctgcgtc
gcgttggccgaccgcatcgacacgctggtcgccttcttcgcgcgcgggatcaagccgacc
gggtcgaaggacccgttcgcgctgcgccgcgccgcgttgcagacgatccagacgatcctc
gtcaacggcacccgcatgaacctgctggcgacgatcgagcaggccaagacggggctcggc
gcgagcgggctcgacagcgccgagctgctcgacttcttcgccgaccgcctgaaggtccag
cagcgcgaggcgggcgtccgccacgacctgatcgacgcggtgttcgcgctgggcggggag
gatgatctcgtccgcctgctggcgcgggtgaaggcgctccaggcgttcgtcgagaccgag
gacggcgcgaatctgctcgccggctacaagcgcgcggccaacatcctcaggaaggagggc
ggggtgcccgaaggcgcctcggcgaccccggattaccaaccggaagtcgcggaatcggca
ctgatcgccgcgctcgacgcggccgagccgaaggccgcggcggcggtcgaagcggaggat
ttcgcgggcgcgatggccgctctcgccacgttgcgcgggccgatcgacgccttcttcgat
caggtcatcgtcaacgattcttcgtcatcgaaaagaaacactcggctcgcgctgcttgaa
aaaatccgtgttgcggtgcacaacgtcgccgacttctcgaacatcgagggctga
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