Rhizorhabdus wittichii DC-6: HY78_01685
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Entry
HY78_01685 CDS
T05200
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HY78_01685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_01685
Enzymes [BR:
sphd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HY78_01685
DNA repair and recombination proteins [BR:
sphd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HY78_01685
Prokaryotic type
HY78_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ARR52257
LinkDB
All DBs
Position
324382..325416
Genome browser
AA seq
344 aa
AA seq
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MSVDAVPENLLAWYDAHHRRLPWRAAPGEAPTDPYRVWLSEIMLQQTTVAAVKPYFDRFT
TRWPTVTDLARADEGEVMAAWAGLGYYARARNLIACARAVADDHGGRFPDSEAGLRALPG
IGDYSAAAIAAIAFGRRAVVVDANVERVASRLFAFDEALPRARPALRALVDRITPDARAG
DFAQAMMDLGSSICTVRAPQCLLCPLRDGCAARIAGNPEDYPVKAAKKAKPQRLGTAFWI
EDGARVWLVRRPDKGMLGGMHALPSGPWTDEDPGLADAPVDAPWREAGSVDHVFTHFALR
LRVVTAVQPLRANDGEWWPIDEIEQAGLPTLFARAAARAIASRA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgatgccgtccccgaaaatttgctggcctggtacgatgcccatcatcgccgc
ctgccctggcgcgccgcccccggcgaggcgccgaccgatccctatcgcgtctggctgtcg
gagatcatgctgcagcagaccaccgtcgcggcggtgaagccctatttcgatcgcttcacg
acgcgctggccgaccgtcaccgacctcgcccgcgccgacgagggcgaggtgatggccgcc
tgggcggggctcggctattatgcccgcgcccgcaacctgatcgcctgcgcccgcgccgtc
gccgacgatcatggcgggcgctttcccgacagcgaggcggggctgcgcgcgctgcccggc
atcggcgactacagcgccgccgcgatcgccgcgatcgccttcggccgccgcgcggtcgtc
gtcgacgccaatgtcgagcgggtggcgagccgcctgttcgcgttcgacgaggccctgccc
agggcccgcccggcgctgcgcgcgctggtcgaccggatcactcccgacgcgcgcgccggc
gacttcgcccaggcgatgatggacctcggctcctcgatctgcacggtccgcgcgccgcaa
tgcctgctctgcccgctgcgcgacggctgcgccgcgcggatcgcaggcaatcccgaggac
tatccggtgaaggccgcgaagaaggccaagccgcagcggctcggcaccgccttctggatc
gaggacggcgcgcgcgtctggctggtgcggcggcccgacaagggcatgctcggcggcatg
cacgcgctgccctcgggcccctggaccgacgaggaccccggcctcgccgacgcgccggtc
gacgcgccctggcgcgaggcggggtctgtcgaccatgtcttcacccatttcgcgctccgg
ctgcgcgtcgtcaccgccgtgcaaccgctccgcgccaatgacggcgaatggtggccgatc
gacgagatcgagcaggccggcctccccaccctcttcgcccgcgccgccgcgcgcgccatc
gccagccgcgcatag
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