Rhizorhabdus wittichii DC-6: HY78_01835
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Entry
HY78_01835 CDS
T05200
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphd03009
]
HY78_01835
Enzymes [BR:
sphd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HY78_01835
Ribosome biogenesis [BR:
sphd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HY78_01835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Met_10
MTS
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ARR52286
LinkDB
All DBs
Position
complement(354919..356136)
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AA seq
405 aa
AA seq
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MSDEAVKDWEPIVRIAARGEGITADGRHSPLSAPGDLLGLDGSLQWGPHHVEPPCRHFPK
CGGCQLQQVDDQSYADFLGQRITGALAQQKIDAPPLAPAALSAPGTRRRASLHAERQGKR
MLLGFNEAQSHHIVDLRMCAVLDPKLFALVDPLRRLLHPMLRDRRAAGVQMTLVDQGVDL
LIEKVEVDGLAAIEGLNDFAQAHGLARLSVDDGYGPQPRWEPEPATVTLGGVAVPFPAGG
FLQATAEGEAALLAEVEAIVGDARLVADLFAGLGTFALPLARTRRVYAAEGARDAVLGLK
AAADRSQRMIGIDHRDLFRRPLDAAELDRFDVVVLDPPRAGAREQMPALAATTKVRRIAY
VSCNPSTFGRDARTLVEGGWRLERITPVGQFRWSTHTELVAAFAR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgaggcagtgaaggactgggagccgatcgtccgcatcgccgcccgcggcgag
gggatcaccgccgatggccgccattcgccgctgtcggcgccgggcgacctgctcgggctc
gacggcagcctgcaatgggggccgcaccatgtcgagccgccgtgccgccattttcccaaa
tgcggcggctgccagctccagcaggtcgacgaccaatcctatgccgatttcctcggccag
cggatcaccggcgcgctggcccagcagaagatcgacgcgccgccgctggcgcctgccgcg
ctgtctgcgcccgggacgcgccgccgcgcctcgctccacgccgaacggcagggcaagcgg
atgctgctcggcttcaacgaggcgcagagccaccatatcgtcgacctgcgcatgtgcgcg
gtcctcgatccgaagctgttcgcgctggtcgatccgctgcgtcggctgctccacccgatg
ctgcgcgaccggcgcgcggcgggggtgcagatgacgctggtcgaccagggcgtcgacctg
ctgatcgaaaaggtcgaggtcgacgggctcgccgcgatcgaggggctcaatgatttcgcg
caggcgcatggcctcgcgcggctgtcggtcgatgatggctacggcccgcagccgcgctgg
gagcctgagccggcgacggtgacgctgggcggcgtcgcggtgcctttcccggcgggcggc
ttcctccaggcgaccgccgagggcgaggcggcgctgctcgccgaggtcgaggcgatcgtc
ggcgacgcccggctggtcgccgatctcttcgccgggctcggcaccttcgcgctgccgctg
gcgcggacgcggcgcgtctatgcggccgagggcgcgcgtgacgcggtgctggggctgaag
gcggccgccgaccgcagccagcggatgatcggcatcgaccatcgcgacctgttccgccgg
ccgctcgacgccgccgaactcgaccgcttcgacgtggtcgtgctcgatccgccccgcgcg
ggcgccagggaacagatgcccgcgctcgccgcgacgacgaaggtgcggcggatcgcctat
gtctcgtgcaacccctccaccttcggccgcgacgcgcggacgctggtcgagggcggctgg
cggctggagcggatcacgccggtcggccagttccgctggtcgacccacacggaactggtg
gcggcgttcgcacggtag
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