Rhizorhabdus wittichii DC-6: HY78_02050
Help
Entry
HY78_02050 CDS
T05200
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_02050
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARR52324
LinkDB
All DBs
Position
complement(399857..402058)
Genome browser
AA seq
733 aa
AA seq
DB search
MASRLSKLMASAAIVMGSAGGAMAQVSTTEAGFEPGEIVVTAQKRTQSAQAIGVAVSALG
ADNLAALGRQDISALAAQVPGLQVNQYSPTVTVFNIRGVSQNDFADSQEAPIAFYNDEVY
ISALGAIAGMTYDLERVEVLRGPQGTLFGRNATGGLIQIVSAKPTDHLDGFVTATVGSYG
QVATEGAVGGPLSDRLRARLSFTTNHGGGYFKNRIGRDLGAAKFYAGRIQLAGDVGEGGK
FNIKVQALRNDRDRQAGIYSHRSAFPNALGLGVYFDPSENAWGNCNGCDALGYAEPDRDP
FTGALNGPNYFSRTFWAVTARYEQDLGGATLTSITDYQDLRKRYGEDSDMSPATNFVYTT
AQDLYQLSQELRLSGEGDRLTWLAGLYGIKIHTKNGYVTDTTGAFGLLERYDSVLNTESV
AAFGQLEYKLDDRFTLIGGLRYSRDWKRFDYVHSENGVQDFAFDRRLFPDLAKRRFSDYS
GKIELDFKPSRNAFLYASVNRGTKSGGFGTQAFGPFDPATIAFDGEVLTNVEGGVKLTLL
NRTTNFNVAGFHYKYSGYQSFELVGVTQIIRNKPARIKGLEFEFTTRPVAGLYLQAFLTL
LDGEVRNVTVPSGDVLDRDMPQAPSLSAGGLIRYEFAAGPGRLALQTNWKHDSRQYFSTF
NAPVDREPARWVGDARVSYAFDDLPIEAAFFVNNLTDRKYRLYTLDLSGPFGFTQQNYAR
PRWFGGSLTYRIQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgactttcaaaactgatggcctccgccgcgatcgtcatgggttccgccggc
ggcgcgatggcgcaggtctccaccaccgaagccggtttcgagccgggcgagatcgtcgtc
accgcgcagaagcggacgcagagcgcgcaggcgatcggcgtcgccgtctcggcgctgggg
gcggacaatctggccgcgctggggcggcaggacatatcggcgctggcggcgcaggtgccc
ggcctgcaggtcaaccagtacagcccgacggtgaccgtcttcaacatccgcggcgtgtcg
cagaacgacttcgcggacagccaggaggcgccgatcgccttctacaacgacgaggtctat
atcagcgcgctcggcgcgatcgccggcatgacctacgacctcgaacgggtcgaggtgctg
cgcgggccgcagggcacgctgttcggccgcaacgccaccggcggcctgatccagatcgtg
tcggccaagccgaccgaccatctcgacggcttcgtcaccgccacggtcggcagctatggc
caggtcgcgaccgaaggcgcggtcggcggcccgctgagcgaccggctgcgcgcgcgcctg
tccttcaccaccaaccatggcggcggctatttcaagaaccggatcggccgggacctgggc
gccgcgaaattctatgccggtcgcatccagcttgccggggatgtcggcgagggcggcaag
ttcaacatcaaggtgcaggccctgcgcaacgaccgcgatcgtcaggcgggcatatattcc
catcgctccgccttcccgaacgcgctgggcctgggcgtctatttcgacccgtccgaaaac
gcctggggcaattgcaacggctgcgatgccctgggctatgcggagcccgatcgcgatccc
ttcaccggagcgctcaacgggccgaactatttcagccgcaccttctgggccgtcaccgcg
cgctacgaacaggatctgggcggcgcgacgctgacctcgatcaccgactatcaggacctg
cgcaagcgctatggcgaggacagcgacatgtcccccgccaccaacttcgtctacacgacg
gcgcaggacctctatcagctttcccaggaattgcggctgtcgggggagggcgaccggctc
acctggcttgccggcctctacggcatcaagatccacacgaagaacggctatgtcaccgac
acgaccggcgccttcggcctgctcgagcgatatgacagcgtcctgaacaccgagtccgtc
gccgccttcggccagctcgaatataagctggacgaccggttcaccctgatcggcggcctg
cgctattcgcgcgactggaaacggttcgattatgtgcattccgagaatggcgtgcaggac
ttcgcgttcgacagaaggctgtttcccgatctcgcgaagcggcgcttcagtgattattcg
ggcaagatcgagctcgatttcaagccgagccggaacgccttcctttatgccagcgtcaat
cgcggcaccaagagcggcggcttcggcacccaggccttcggacccttcgatccggcgacg
atcgccttcgatggagaggttttgaccaatgtcgaaggcggcgtgaagctcacgctgttg
aaccggacgacgaacttcaacgtcgccggcttccactacaaatatagcggctaccaatcg
ttcgaactggtcggcgtcacccagatcatccgcaacaagcccgctcgcataaaggggctc
gaattcgagttcacgacccgtccggttgccggcctctatctccaggcgttcctgaccctg
ctcgacggcgaggtccgcaatgtcacggttccctcgggcgatgtcctcgatcgggacatg
ccgcaggcgccctcgctcagcgcgggcggcctgatccgctacgaattcgcggcggggccg
gggcggctggcgctccagaccaactggaagcatgacagccggcaatatttctcgaccttc
aacgccccggtcgatcgcgagccggcccgctgggtcggcgatgcgcgcgtctcctatgcc
ttcgacgacctgccgatcgaggccgccttcttcgtcaacaacctgaccgaccggaaatac
cggctctacacgctcgatctgtcggggcccttcggcttcacccagcagaactacgcccgc
ccgcgctggtttggcggcagcctcacctaccgcatccaatga
DBGET
integrated database retrieval system
