Rhizorhabdus wittichii DC-6: HY78_04640
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Entry
HY78_04640 CDS
T05200
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HY78_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphd03019
]
HY78_04640
Messenger RNA biogenesis [BR:
sphd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HY78_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ARR52783
LinkDB
All DBs
Position
complement(967272..967748)
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AA seq
158 aa
AA seq
DB search
MKKTLPYRPAAAIMLLNAEDKVFVAQRIDSALEAWQMPQGGLDPDEAPEAGALRELEEET
GIGPGLVEILAKAPDILLYDLPPELQGKIWGGRYRGQAQHWFVARFLGTDADVDLDTPEP
EFRAWKWVDAGELVDLIVPFKRELYTRVIEVFRDHLPR
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagacgcttccctatcgcccggcggcggcgatcatgctgctcaatgccgaggac
aaggtgttcgtggcgcagcggatcgacagcgcgctcgaggcctggcagatgccgcagggc
gggctcgaccccgacgaggcgcccgaggccggcgcgctgcgcgagttggaggaggagacg
ggcatcggccccggcctcgtcgagatcctggccaaggcgcccgacatcctgctctacgac
ctgccgccggaattgcagggcaagatctggggcggtcgctatcgcgggcaggcgcagcac
tggttcgtcgcgcgcttcctaggcaccgacgccgatgtcgacctcgacacgcccgagccc
gaattccgtgcctggaaatgggtcgacgccggcgagctggtcgacctgatcgtgccgttc
aagcgcgagctctacacgcgggtgatcgaggtgttccgcgatcatctgccgcgctga
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