Rhizorhabdus wittichii DC-6: HY78_05205
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Entry
HY78_05205 CDS
T05200
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sphd03016
]
HY78_05205
Enzymes [BR:
sphd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HY78_05205
Transfer RNA biogenesis [BR:
sphd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HY78_05205
Prokaryotic type
HY78_05205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ARR52886
LinkDB
All DBs
Position
complement(1087496..1088470)
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AA seq
324 aa
AA seq
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MVRHARHGPAGRLQPRAMHGWIIIDKPVGPGSTQIVSAVKRALRTGGYGKVKVGHGGTLD
PLASGVLPVALGEATKLSGRMLDADKAYDFTIGFGVETDTLDAEGKAVAVSGVCPTLDAI
EAVLPHFTGAIEQVPPAYSALKIDGQRAYDRARAGESFEMKTRAVTIHSLTIPSSSAPLR
GNEGLNEITLSCSVSKGTYIRSLARDIARALGTVGHVTMLRRTKAGPFILSQAISLDKLD
ELAKGRQLEKALLPLTAGLDDIPALSVTPDQARALREGRRLIGIAAPTGLNLAIDGDMPV
ALVEVEDREVRVVRGFNMMSKEDR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggttcgccatgctcgacatggcccggccggacgcctacagccgcgcgccatgcatggc
tggatcatcatcgacaagccggtcggccccggctcgacccagatcgtctcggcggtcaag
cgcgcgctccggaccggcggctacggcaaggtcaaggtcggccatggcgggacgctcgat
ccgctggcgtcgggcgtgctgcccgtcgcgctgggcgaggcgaccaagctgtcgggacgg
atgctcgacgccgacaaggcctatgacttcaccatcggcttcggggtcgagaccgacacg
ctcgacgccgagggcaaggcggtggcggtgtccggcgtctgcccgacgctcgacgcgatc
gaggcggtgctgccgcacttcaccggagcgatcgagcaggtgccgccggcctattccgcg
ctgaagatcgacggccagcgcgcctatgaccgcgcccgcgccggggaaagcttcgagatg
aagacgcgggcggtgacgatccattcgctcaccattccgtcatcgtccgcgccccttcgc
ggcaatgaaggcctgaacgagatcaccctgtcttgctcggtgtcgaagggcacctacata
aggagcctggcgcgggacatcgcgcgggcgctcggcacggtcggccatgtgaccatgctc
cgccgcaccaaggcgggcccgttcatcctgtcccaggcgatttcgctggacaaactggat
gaactcgctaagggccggcagcttgaaaaagcactcttgccgctgacggcagggctggac
gacatcccggctctatccgtcacccccgatcaggcaagggcgctccgcgaggggcgcaga
ttgatcgggattgccgcacccaccggcctcaaccttgcgatcgacggcgacatgcccgtt
gcgctggtcgaggtcgaggaccgcgaggttcgcgtggtgcggggcttcaatatgatgtcg
aaggaagacagatga
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