Rhizorhabdus wittichii DC-6: HY78_05415
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Entry
HY78_05415 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_05415
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR52926
LinkDB
All DBs
Position
1134977..1137739
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AA seq
920 aa
AA seq
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MSHMHFRTRVSSLAMAAMAGLLVGLPMAASAQALPASAADEPAADQEITVTGSRIIRDGT
EAPSPLTVVGADLLDKRQAVNVADVLNELPAFRGSTTPASTTNNTKNVGANYANLRSLGT
NRTLTLVDGVRHVPSSDLGQVDLNFIPSLLVERVEVVTGGASAVYGSDAVAGVLNLVLRR
KYEGFQVRGDVGMTQHSDGKEYRGAFLGGVQFGGGRGYATLAVDVYRSDGAKDAYSRDWG
RRSYGLVTNVAGATPVRIIASNVQNATMTPNGIITSGPLRGTTFNADGTPRPFTYGQLPG
AQLMIGGEGQGTRLYLGDALLPELDRRVAYLRTGYEVSDALELSQDFSYGWSKGVASTPY
YFNYGNLTIQRENPFLPASVAAQMDAAGVSSFGFGRLWTDVGRPVPVSTTETWRSVTGAK
GSLAPSWNWAANFEYGQNKYRQQILGAFMAARAAEMIDAVSAPDGSVVCRVALTNPSTAC
RPFNPFGTNRNTADVQNYFRADQDLRQTQREIAASAGITGKLFDIGAGRWGVAMGGEYRR
ETLHAVADPLSRAGVFTFGNARNVDGKFNVKEAYIELEAPLLADLPFVEALTLNGAYRYA
DYSSSGGISMWKLGATWDVSDDLRFRVTRSRDVRAPNIPELFTPARGLATQTILDPFRGN
AATLVFPFVQGNPNLKPETANTLSFGAVLKPSFIPGFNFSVDYYDIKIDDAIATVAPQDI
VNLCFGGQNDACSQIVRDGSGTITQISSTGINIATQRTKGIDLEFGYRTDLGEGKLDFRV
FANHTIKSTLVNGALITRLAGQNNGAGTPSWAASAIVGYDINRISATLQARFISAGKYDR
SFVEGRDIADNTLPSATYLSLNAQYRIGPAEEPGRYKLFATVDNLLDKDPPAVPASVLPT
NPQFYDVLGRRFRVGFSANF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatatgcatttcaggacacgcgtcagctcgcttgccatggccgcgatggccggg
ctcctcgtcggcctgccgatggcggcgtcggcgcaggcgctgcccgccagcgcggccgac
gagccggcggcggaccaggagatcaccgtcaccggctcgcgcatcatccgcgacggcacc
gaggcaccgagcccgctgaccgtggtcggcgcggacctgctcgacaagcgccaggcggtg
aacgtggccgacgtgctcaacgagcttccggccttccgcggttcgaccacgccggccagc
accacgaacaacacgaagaacgtcggcgccaactacgccaacctccgcagcctcggcacc
aaccggacgctgaccctggtcgacggcgtccgccatgtgccctcgtccgacctcggccag
gtcgacctcaacttcatcccctcgctgctcgtcgagcgcgtcgaggtcgtcaccggcggc
gcttcggcggtctatggatcggacgcggtcgcgggcgtgctcaacctggtgctgcgccgc
aaatatgaaggcttccaggtgcgcggcgacgtcggcatgacgcagcattcggacggcaag
gaatatcgcggcgccttcctgggcggcgtgcagttcggcggcggacgcggctatgcgacg
ctggcggtcgacgtctatcgcagcgacggcgccaaggacgcctattcgcgcgactggggc
cggcgctcctacggtctcgtcaccaacgtcgccggcgcgacgccggtgcggatcatcgcc
tcgaacgtccagaacgcgacgatgacgccaaacggcatcatcacctcgggcccgctgcgc
ggcaccaccttcaacgccgatggcacgccgcggccgttcacctatggccagcttcccggc
gcgcagctcatgatcggcggcgagggccagggcacccggctctatctcggcgacgcgctg
cttcccgagctcgaccggcgggtggcgtatctgcgcaccggctacgaggtctccgacgcg
ctcgagctgagccaggacttctcctatggctggtcgaagggcgtcgcatcgaccccctat
tatttcaactatggcaacctgacgatccagcgcgagaatccgttcctgccggcgtcggtc
gcggcgcagatggacgccgcgggcgtctcctccttcggcttcgggcggctgtggaccgac
gtgggccggccggtgccggtctcgaccaccgagacctggcgcagcgtgacgggggccaag
ggctcgctcgcgccgagctggaactgggccgccaatttcgaatatggccagaacaagtat
cgccagcagatcctgggcgcgttcatggcggcgcgcgcggccgagatgatcgacgcggta
agcgcgcccgacggctcggtcgtctgccgcgtggcgctgaccaacccgtcgaccgcctgc
cgcccgttcaacccgttcggcaccaaccgcaacaccgccgacgtccagaattatttccgg
gcggaccaggacctgcgccagacccagcgcgagatcgcggccagcgcgggcatcaccggc
aagctgttcgacatcggcgccggccgctggggcgtcgcgatgggcggcgaatatcgccgc
gagacgctccacgcggtcgcggacccgctgtcgcgggccggcgtgttcaccttcggcaat
gcgcgcaacgtcgacggcaagttcaacgtcaaggaagcctatatcgagctggaggcgccg
ctgctcgccgaccttccgttcgtcgaggcgctgaccctgaacggcgcctatcgctacgcc
gactacagttcgagcggcggcatcagcatgtggaagctgggcgccacctgggacgtgtcg
gacgacctgcgcttccgcgtcacccgctcccgcgacgtgcgcgcgccgaacatccccgag
ctgttcaccccggcgcgcggcctcgcgacgcagacgatcctcgatccgttccggggcaat
gccgcgacgctggtcttccccttcgtccagggcaatcccaacctgaagccggagaccgcg
aacacgctgtcgttcggcgcggtgctgaagccctccttcatcccgggcttcaacttctcg
gtcgactattacgacatcaagatcgacgacgcgatcgcgaccgtcgcgccgcaggacatc
gtcaacctgtgcttcggcggccagaacgacgcctgcagccagatcgtccgcgacggatcg
ggcacgatcacccagatcagcagcaccggcatcaacatcgccacccagcgcaccaagggc
atcgatctcgagttcggctaccggaccgacctgggcgagggcaagctcgacttccgcgtc
ttcgccaaccacacgatcaagtccacgctggtcaacggcgcgctcatcacccggctggcc
gggcagaacaacggcgccggcaccccgtcctgggcggcgagcgcgatcgtcggctatgac
atcaaccggatctccgcgaccttgcaggcccgcttcatcagcgcgggcaagtacgaccgg
agcttcgtcgaaggccgcgacatcgccgacaacacgctgccgagcgcgacctatctgagc
ctcaacgcccagtatcggatcggccccgcggaggagccgggccgctacaagctgttcgcg
acagtcgacaatctgctcgacaaggacccgccggcggtgcccgcctcggtgctgccgacc
aacccgcaattctacgacgtcctcgggcgccgtttccgggtcggtttctcggcgaacttc
tga
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