KEGG   Rhizorhabdus wittichii DC-6: HY78_05800
Entry
HY78_05800        CDS       T05200                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY78_05800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_05800
Enzymes [BR:sphd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HY78_05800
Secretion system [BR:sphd02044]
 Type IV secretion system
  Trb secretion system protein
   HY78_05800
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind AAA_19 ABC_tran nSTAND3 AAA_29 nSTAND_NTPase5 AAA_22 DUF815 DEAD cobW CbiA ATPase DUF87 ResIII RsgA_GTPase MMR_HSR1 P-loop_TraG Septin AAA_7 AAA_10 NACHT ABC_ATPase MobB AAA_28 Sigma54_activat GTP_EFTU PduV-EutP TsaE AAA_23 SLFN-g3_helicase ATP_bind_1 AAA_25 AAA_30 SRPRB IstB_IS21 Pox_A32 ArnB_C SRP54 Viral_helicase1 nSTAND6 Dynamin_N UvrD-helicase
Other DBs
NCBI-ProteinID: ARR52992
LinkDB
Position
complement(1214579..1215565)
AA seq 328 aa
MSIQPIRSLGETRGARMLRTALGPSIAAWLDDPAVIEVMLNPDGRLWVDRLGEGISDTGM
TLAAADGERIIRLVAHHVGVEVHARSPRVSAELPEGGERFEGLLPPVVAAPAFAIRKPAV
AVFTLDDYAAAGIMSPAEAAALRDGVQTRANILVAGGTGSGKTTLVNALLAEVAKTTDRI
VLIEDTRELQCAAPNLVAMRTKDGVVTLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHVGTALGALRRMEQLIQEAVVTVPRALLAETIDLIAVLVRDGHGRRLAE
LARVEGIDAATGDYRLTPLAPPNLGDAP
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgtccatccaaccgatccgttccttgggggaaacacgcggcgcacggatgctgcgcacg
gcgctggggccgtcgatcgcggcctggctcgacgatcccgccgtgatcgaggtgatgctg
aacccggacggacggctctgggtcgatcggctcggcgaaggcatcagcgacaccggcatg
acgctggccgccgcggacggcgagcgcatcatccgtctggtcgcgcaccatgtaggcgtc
gaggttcacgcccgatccccgcgtgtctcggccgagctgcccgaaggaggggagcggttc
gaggggttgctgccccccgtcgtcgccgcgcccgccttcgcgatccgcaagccggccgtc
gccgtcttcacgctcgacgactacgccgcggccgggatcatgtcgccggccgaggccgcg
gcgctgcgcgatggcgtgcagacacgcgccaatatccttgtcgcgggcgggaccggcagc
ggcaagaccacgctggtcaacgcgctcctcgccgaagtcgccaagaccaccgaccgcatc
gtcctgatcgaagacacgcgcgagcttcagtgcgccgcgccgaacctcgtcgccatgcgg
accaaggatggcgtcgtcacgctgtccgatctcgtgcggtccagcctgcggctgcgcccc
gaccgcatccccatcggcgaggtgcgcggcgccgaggcgctcgatctcctcaaagcctgg
ggcaccggccaccccggcggcatcggcaccatccacgtcgggaccgcgctcggcgcgctg
cgccgcatggagcagctcatccaggaggccgtggtcacggtcccccgcgcgctgctggcc
gagaccatcgacctgatcgcggtgctggtccgcgacggacacggccgccgcctcgccgag
ctggcccgcgtcgaggggatcgacgccgcgaccggcgattaccgcctgacccccctcgca
ccccccaacctcggagacgcaccatga

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