Rhizorhabdus wittichii DC-6: HY78_08870
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Entry
HY78_08870 CDS
T05200
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_08870
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARR53524
LinkDB
All DBs
Position
1812867..1815092
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AA seq
741 aa
AA seq
DB search
MKRVLLSAAASIAAIATAGTGTAFAQNVVDAQDTDGVPDIVVTATRMGETQLQSTPIAVT
ALGGDQLDARGVRDVQDLKAYVPSLQVSDLSGYTQLFIRGIGSNIVFIGSDPSTTIHSDG
IYLARPLSYLTDFLDVERVEVLRGPQGTLYGRNSVGGTINVVSRKPSDTLQAQAQFGYGS
YDRYAAQGYVSGPIAGGVRASLAVDVSGHDAFRKNISTGNDAEDLKSRGVRGQLLIPVGD
GEWTIRADWSRQSGAFGAYPKLIRPTGNPFDDAILGDFDKVSMNRDNFTVLKNYGAASDL
VLPLTDSIKLRSLTGYRAFRGSIETDADASSIDILRNLISPIRQHQFSQEFTLLGDTGPL
EWVLGAYYFNERNREPLTLALFPFGASHIQRPLLKARSIAGFAQGEYKLSDQLSFIAGLR
YTRERKAYAISDYFTASTDLDPAVAEKGFVLAGIPGLPDPFTVDARRHDDAFTPKFGITF
KPTEQVLLYASATRGFKSGGFDYGSSNAADAAAGYGPEKLWSYELGLKSDWLDRRLRVNL
TGFYYDYTDLQVQSYVQIGASFGARTQNAATARVKGLEAEIVARPVRALELSANVAWLDA
EYRRYPNAFVSSFGAFDASGKRLNNAPRWSATFGAAYSFDLAGSGKLTLGADAHVQSSIY
FTAANDGVGAVSGYAEQQKGYGIVNARIGWTSPDDRWKAQLIASNLFDKDYIVGTANYTA
AIAARQGRPREVLVQIGYAFR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtgcttctgtccgcagcagcctcaatcgcagccatcgccaccgccggaacg
ggcaccgcattcgcgcagaatgtcgtcgacgcccaggataccgacggcgtgcccgacatc
gtcgtcaccgcgacccgcatgggcgagacccagctccagtcgacgccgatcgcggtgacc
gcgctgggcggcgaccagctcgacgcgcgcggggtgcgcgacgtgcaggacctgaaggcc
tatgtcccctcgctccaggtgtcggacctgtcgggctacacccagctcttcatccgcggc
atcggatcgaacatcgtcttcatcggctccgaccccagcacgacgatccacagcgacggc
atctatctcgcccggccgctcagctatctcaccgacttcctcgacgtcgagcgggtcgag
gtgctgcgcgggccgcagggcacgctctacggccgcaactcggtgggcggcacgatcaac
gtcgtctcgcgcaagccgtccgacacgctgcaggcgcaggcgcagttcggctatggcagc
tatgaccgctatgccgcgcagggctatgtctccggcccgatcgcgggcggggtgcgggcg
agcctcgcggtcgacgtctccggccacgacgccttccgcaagaacatctcgaccggcaac
gacgccgaggacctgaagtcgcgcggcgtgcgcggccagctgctgatcccggtcggcgac
ggcgaatggacgatccgcgccgactggtcgcgccagtcgggcgcgttcggcgcctatccc
aagctgatccggccgaccggcaacccgttcgacgacgcgatcctcggcgatttcgacaag
gtgtcgatgaaccgcgacaatttcaccgtgctcaagaattacggcgcggcgagcgacctg
gtgctgccgctgaccgactcgatcaagctgcgctcgctgaccggctaccgcgccttccgc
ggctcgatcgagaccgacgccgacgccagctcgatcgacatattgcgcaacctgatctcg
ccgatccggcagcaccagttcagccaggagttcaccctgctgggcgacaccggcccgctc
gaatgggtgctcggcgcctattatttcaacgagcgcaaccgcgagccgctgaccctcgcg
ctgttcccgttcggcgcgtcgcacatccagcggccgctgctcaaggcacgctcgatcgcg
ggcttcgcgcagggcgagtacaagctgtccgaccaactctccttcatcgccggcctgcgc
tacacgcgcgagcgcaaggcctatgcgatcagcgactatttcaccgcctcgaccgatctc
gacccggcggtggcggagaagggcttcgtgctggccggcatccccggcctgcccgatccg
ttcaccgtcgacgcgcgccgccacgacgacgccttcacgccgaaattcgggatcaccttc
aagcccaccgagcaggttctgctctacgcatcggcgacgcgcggcttcaagagcggcggc
ttcgactatggcagcagcaacgcggccgacgccgctgcgggctacggccccgaaaagctc
tggtcctacgagctcgggctgaagagcgactggctcgaccggcggctgcgggtcaacctg
accggcttctactacgactataccgacctgcaggtgcagagctacgtccagatcggcgcc
tcgttcggcgcgcggacccagaatgcggcgaccgcgcgggtgaagggcctcgaggcggag
atcgtcgcccgcccggtccgcgcgctcgaactgtcggcgaacgtcgcctggctcgacgcc
gaatatcgccgctaccccaacgccttcgtcagctccttcggcgcgttcgacgcatcgggc
aagcggctgaacaacgcgccgcgctggtcggccaccttcggcgcggcctacagcttcgac
ctggccgggtcgggcaagctgacgctgggcgccgacgcgcatgtccagagtagcatctac
ttcaccgccgccaatgacggggtgggcgcggtctccggctatgccgagcagcagaagggc
tatggcatcgtcaacgcgcggatcggctggaccagccccgacgaccgctggaaggcgcag
ctgatcgccagcaacctgttcgacaaggactatatcgtcggcaccgccaactacaccgcc
gcgatcgccgcccggcagggccgcccgcgcgaggtgctggtccagatcggctacgccttc
cggtga
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