Rhizorhabdus wittichii DC-6: HY78_10755
Help
Entry
HY78_10755 CDS
T05200
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sphd03032
]
HY78_10755
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_10755
Enzymes [BR:
sphd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HY78_10755
DNA replication proteins [BR:
sphd03032
]
Prokaryotic type
DNA Topoisomerases
HY78_10755
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HY78_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ARR53868
LinkDB
All DBs
Position
complement(2238308..2239267)
Genome browser
AA seq
319 aa
AA seq
DB search
MRHRPIDPTDTIDSAPGITRVRRGGGWRFVAPDGSTIRDPDERMRILALGIPPAWRRVWI
NPDLRAPVQATGIDAAGRKQYRYDSAWREARDEEKFAALPAFAAHLPRLRAVVRRALDSD
DPWERARAAAVRLLDGFAIRVGSDDSAARGSFGATTLLNRHARIDGDAIRLCFFGKHGIR
AELSGRDAALAAALAELKQAGAGELFAMRSGVRVRAADINQWIAELTDGSGTAKTFRTWR
ACAVAAGMLARGRRTSVKTLLEEVARQLGNTPAVCRTSYVAPAFIEMAKAGRWIETVPAM
PRGLRASERASLAVLTGRT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaccgcccgatcgacccgaccgacacgatcgattccgcccccggcatcacccgc
gtccggcgcggcggcgggtggcgcttcgtcgcccccgacggctcgaccatccgcgacccc
gacgaacggatgcggatcctcgcgctcggcatcccgccggcctggcgccgggtgtggatc
aaccccgatctgcgcgcgccggtccaggcgaccgggatcgatgccgccgggcgcaagcaa
tatcgctacgacagcgcgtggcgcgaggcgcgcgacgaggagaaattcgccgcgcttccc
gcgttcgccgcgcacctgccccggctgcgcgccgtcgtccgccgcgcgctcgacagcgac
gatccgtgggaacgcgcgcgggcggcggcggtgcggctgctcgacggcttcgcgatccgg
gtcggctccgacgattcggcggcgcgcggcagcttcggcgcgacgacgctgctcaaccgc
cacgcgcggatcgacggcgacgcgatccggctgtgcttcttcggcaagcacggcatccgc
gccgagctgtcggggcgcgacgcggcgctggcggcggcgctcgccgagctcaagcaggcg
ggggccggcgagctgttcgcgatgcggtcgggggtgcgggtgcgcgccgccgacatcaac
cagtggatcgccgagctgaccgacggcagcggcaccgccaagaccttccggacctggcgc
gcctgcgcggtcgcggcggggatgctggcgcgcgggcggcggacctcggtcaagaccctg
ctggaggaggtggcgcgccagctcggcaacacgccggcggtgtgccgcacatcctatgtc
gcgccggccttcatcgagatggccaaggcgggccgctggatcgagacggtgcccgccatg
ccgcgcggcctgcgcgcgagcgaacgggcgagcctggcggtgctgaccggccggacgtga
DBGET
integrated database retrieval system
